Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2531 |
Symbol | |
ID | 7086097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3010286 |
End bp | 3013726 |
Gene Length | 3441 bp |
Protein Length | 1146 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643461424 |
Product | histidine kinase |
Protein accession | YP_002358448 |
Protein GI | 217973697 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.014523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00504999 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTTAA CCTTAGTCGT CGCCGTTATT GCCGTCTGTT ATGTCTCGCT TTTATTCCTA TTAGCGTGGG GGGCGGAGCG TTGGTTTAGC CGGATCACCA AAAAGCTACA GGTCGGTATT TATGGCCTGA GCTTAGCGGT CTACTGCTCT TCGTGGAGTT TTTTAGGCAC AGTCGGCCAA TCGGCTAAGG ATCTCTGGTC TTTTTTACCG ATTTTTATCG GCCCCATTCT GATTTTCACC TTAGGTTTTG GCATGTTACG CAAGATGGTA TTAGTGTCTA AGGCACAAAA TATCACCTCA GTGGCCGACT TTATTGCCGC CCGATACGGC AAATCCCAAA CCTTAGCCGC CTTAGTCACC TTAATCGCCT TGTTTGGCAT CATGCCCTAT ATCGCCCTGC AGCTTAAGGC GATGGTGTTC AGCCTTAACC TGTTTCAACC CGCAGACGAT CCCCTCGATG GCGTGACTAT CCCGTTACTG ATCACGTCTT TGTTAGCCAT ATTTGCCATT TTATTTGGTA CCCGTAAGCT CGATGCCACC GAGCATAATC CCGGCATGAT GCTCGCGATT GCCTTTGAGT CTCTGGTGAA GATCGCCGCA TTTTTATTGG TCGGCGTAGT CATTAGTTTT GGGGTGTTCG ATGGTTTTGG GGATATTTGG CAGCAGGCGA ATGCGCAGTC GCTGATCAAT TATCCCAATC CCCGTATCGA AGCTTTAATG CCTGAGTTAC TTGTCGGAAT GGCGGCGTTT TTGTGTATGC CAAGGCAGTT CCATGTGATG GTGGTTGAAT GCGCCGATGA GTCTGTGTTG TCGAAAGGAC GTTGGCTGTT TCCCATCTAT TTAGCGCTTT TTGGTTTATT CGTTGGGCCG CTCGCCTTGG CGGGGAAGAT CATCCTCGGC GATTCTGTGT CGGCCGATAC CTATGTGATT AATTTGCCAC TCGCCTTAGA TCAACCTTTG CTGGCGGTGA TTGCGCTGCT GGGCACTCTT TCGGCGGCAA CCGGCATGGT GATAGTGGCG GTGGTGACTA TTAGTGTGAT GGTGAGTAAC GAATGGCTGG TGCCTGTGAT GCTGCGCACG GGCCATATCC GCGAGAAAAA CTTCAGCCAG TTCTCGCAGC TACTACTCAA TGCTCGCCGT TTGGCGATCG TGATCATTCT TGGCTTAGGT TATGGCAGTT ATCTGGCCTT AGCGGACAGT GATTCCTTAT CCCATCTCGG CATGTTGTCC TTCGGGGCTT TTGCTCAGTT AGCGCCTGCC TTAGTGGGCG GACTCTATTG GAAACACGGC AATCGTGCTG GGGTGTTTTT AGGACTCGGC GTAGGCTTTT CGCTGTGGTT TTACATCATG TTGCAGGGCA TGACAGATGT GCAAAGTTCA TCGATGTTCT TGTCTGGCGT CGTTAGCGAG AAAGGCTTGC TAGATGCGAT AACGCCCAAT GTGCGTGATG CGCTGACGGC ACTTTTTGCC AATATCGCCT GTTATATTTT GGGGTCGATT TGGTTTAGGG CGGGGGTGGC CGAGCGTATT CAGGCCAGTG CCTTTGTCAG TCCTGGCAAG TTGAAAAACA GCGCCAATAA GAAAAATGGC CCGATTTCAC AGCAGGATTT GCTTATTCTA GCCAGTCGAT TCGTCAGCCC AACACGCGCC TACGAGAGTT TTAGCCGTTT CTCTATTGAT GCGGTAAAAA GTGATAGTTG GCATAAAGCG GCGCCGCCTG AGCTGATTTT CCACACGGAA CGTTTATTGG CGGGCGTACT CGGCGCCTCA AGCGCAGCGC TGGTGATGGA TTCTGTGCTG CAAGGGCGTG ATTTGGCGCT GGATGAAGTG TTCAGTCTAG TGGATGAAGC TTCATCGAAA ATTATGCTCA GCCAAGACAT GCTGCGCGGC GCGATTGAGC ACGCCTATGA AGGCATGAGC GTGATAGATA ACGATCTCAA CCTAGTAGCT TGGAATTATA AATATGTGGA GCTGTATCAA TATCCCGATG GATTCTTGCA GCAGGGCATG CCCATCAGCG AAGTGATCCG TTTTAATGCG GCGCGGGGTT ATTGTGGTGA AGGGGAAATC GAACAGCAGG TTGAACAGCG GGTGCAGCAC ATGCGTAATG GCACGCCGCA CACTTCTGAG CGCCATCGCA GGGACGGTAA AGTGATTAAA ATTCAAGGTA ATCCCATGCC AGACGGTGGC TTTGTGATGA CCTTTACCGA TATTACTCAG TATCGCGAGC AGGAGCGCGC GCTGCTCGAG GCCAATGAAA CCTTAGAAAG CCGCGTTAAC GAACGTACCT ATGAATTAGC CATGTTGAAC AGCGAGTTAC TGGAAGCTAA GGCTCAGGAA GAAATTGCCA ACGCCTCTAA GAGTCGCTTC TTAGCCGCCG TTGGCCATGA TTTAATGCAG CCGCTGAATG CCGCGCGGTT GTTTACCGCA TCTTTATCTC AGTATCCCAA TTTAGATCGC GAGGCCAGAA CCACCTTATC CCATGTGAAC AGCTCGCTTA AGATCGCCGG CGAGTTGCTT ACCGATCTGC TGGATATTTC TAAACTCGAT TCTGGCATGG TGGAGGTGAA TCGGCGTGAC TTTGCGATTT CAGAACTGAT CAACGGTTTA TCCGTTGAAT TTGAAGCGAT GGCGGCGGAC AACCAAATCC GCTTTAAGAT GATCCCATGC AGTGCGACCG TTAATTCTGA TCCTTCGCTA TTACGTCGAG TCCTACAAAA TTTTTTAACC AATGCCTACC GTTACGCCCG TGGCGGCAGA GTCTTGTTTG GTTGTCGCCA TCGCGGTCAT TACCTTGAGA TCCAAGTATT GGACACGGGT TGTGGTATCG ATGAAAAAGA AACCCAAGAG ATTTTCAAAG AATTCAAACG GCTGAATAAT CCTAAGAGCA ACAATGTCAG CGGATTAGGC TTAGGTTTAG CAATTGCCGA TCGTATCAGT AAAGTGTTAG AACACGGTAT TCAAGTGTCG TCCCATTTAG GGCGCGGCTC GGTATTCTCT ATTTGTGTGC CGCTCGGGGA GACTGTACGC CAGCCACAAG TGAAGGCGTT GCCATCGCTG TTGCAGCCAT TATCGGGTAT CAAAGTGCTG TGTATCGATA ACGAAGAGGC TATTCTGGCT GGCTTAGAAA GTCTATTAAG TCGTTGGCAA TGTGAGGTTA TTTGCGCAAA AGATTTATCC GATGCACGCA TTAAGCTGGG GCTGAAAGGC GTCGCGCCCG ATATTGTGCT CGCCGATTAT CACTTAGATG ATGGCCAAAA TGGCGTCGAT GCGATGGACG GTATTCGTGC CCTGTATGGC AAAGACTTGC CCGGCATTTT GATCACCGCC AATACCCGTA AAGAGCTGGT GGAAGATGTG CAACGCCGCG GCTATCACTA TATGGCGAAA ATGATAAAAC CTGCCGCGCT GCGCGCCTTG ATTTCTAGCT TAGTGAAATG A
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Protein sequence | MNLTLVVAVI AVCYVSLLFL LAWGAERWFS RITKKLQVGI YGLSLAVYCS SWSFLGTVGQ SAKDLWSFLP IFIGPILIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAALVT LIALFGIMPY IALQLKAMVF SLNLFQPADD PLDGVTIPLL ITSLLAIFAI LFGTRKLDAT EHNPGMMLAI AFESLVKIAA FLLVGVVISF GVFDGFGDIW QQANAQSLIN YPNPRIEALM PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPIY LALFGLFVGP LALAGKIILG DSVSADTYVI NLPLALDQPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT GHIREKNFSQ FSQLLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA LVGGLYWKHG NRAGVFLGLG VGFSLWFYIM LQGMTDVQSS SMFLSGVVSE KGLLDAITPN VRDALTALFA NIACYILGSI WFRAGVAERI QASAFVSPGK LKNSANKKNG PISQQDLLIL ASRFVSPTRA YESFSRFSID AVKSDSWHKA APPELIFHTE RLLAGVLGAS SAALVMDSVL QGRDLALDEV FSLVDEASSK IMLSQDMLRG AIEHAYEGMS VIDNDLNLVA WNYKYVELYQ YPDGFLQQGM PISEVIRFNA ARGYCGEGEI EQQVEQRVQH MRNGTPHTSE RHRRDGKVIK IQGNPMPDGG FVMTFTDITQ YREQERALLE ANETLESRVN ERTYELAMLN SELLEAKAQE EIANASKSRF LAAVGHDLMQ PLNAARLFTA SLSQYPNLDR EARTTLSHVN SSLKIAGELL TDLLDISKLD SGMVEVNRRD FAISELINGL SVEFEAMAAD NQIRFKMIPC SATVNSDPSL LRRVLQNFLT NAYRYARGGR VLFGCRHRGH YLEIQVLDTG CGIDEKETQE IFKEFKRLNN PKSNNVSGLG LGLAIADRIS KVLEHGIQVS SHLGRGSVFS ICVPLGETVR QPQVKALPSL LQPLSGIKVL CIDNEEAILA GLESLLSRWQ CEVICAKDLS DARIKLGLKG VAPDIVLADY HLDDGQNGVD AMDGIRALYG KDLPGILITA NTRKELVEDV QRRGYHYMAK MIKPAALRAL ISSLVK
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