| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2522 |
|---|
| Symbol | |
|---|
| ID | 7087058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3000382 |
|---|
| End bp | 3001293 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461415 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002358439 |
|---|
| Protein GI | 217973688 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.575143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.64922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA TCCAATGCCA AGGGCTGTCG CAACTTTACG GCAGCAAAAA GGCGCTGAAT
GATGTTAACT TCAGCCTAGA AGCGGGTGCG CCCATCGCCC TTGTCGGTCC AAATGGCGCG
GGTAAAACCA CGCTTTTTAG TCTGTTATGC GGCTATTTAT CGCCAAGTGC TGGGACAATA
ACCCTGCTCG GTGAAGCGCC TAATAGCCCT AAACTTTTAG GCAAAATTGC CGCTTTACCC
CAAGATGCGG TGCTCGATCC CAATTTGACC ATTGTTAGCC AGTTAAGCTT TTTCGCGCGT
CTGCAGGGCA TGGGCGTAGA ACAAGCCAGA CAAGAGGCCA TTCGCGTATT GACCTTAGTC
GATTTGGCGG ATGTTGCCGA GCAAAAACCA CCAAGCCTCA GCCACGGTAT GAGTAAACGC
GTATCGATTG CACAGGCGTT GATTGGCTCG CCAGAGTTAG TGCTATTGGA TGAGCCGACC
GCGGGGCTCG ATCCTGCCAA CGCGAAAAAA GTCCGCGAAC TGGTCAAAGC CTTATCGCCC
ACCACAACTT TTATGATCAG CTCCCATAAT CTCGATGAGC TCGAAAAGCT GTGCGATCAG
GTGTTGTATT TAGATAAGGG GCAACTGAGC CAAGCCGTGT CTATGCATGC ATCGACCGAC
AGTGATTACC TGACGTTAAC CATGCAAAGC TGTGACAGTG ATTTGCTGCA AGCGGAAGTG
GCGAAACTGA CGGGCGTGGT GAACGTCAGC TCAAAGCAGA GCAAGGTGTT TATTATTAAG
CTCGCAACGG ATGAAGAAAA AGCACAGAGC AGTGATATTG AAATGCGCCT ATTTACCCTA
TTCAACCAAC ATAAGTGGCA ATACAAGATG CTGCTGAAAG GCCGTACCTT GGAAGAAACG
CTCTTTTCAT AG
|
|---|
| Protein sequence | MSLIQCQGLS QLYGSKKALN DVNFSLEAGA PIALVGPNGA GKTTLFSLLC GYLSPSAGTI
TLLGEAPNSP KLLGKIAALP QDAVLDPNLT IVSQLSFFAR LQGMGVEQAR QEAIRVLTLV
DLADVAEQKP PSLSHGMSKR VSIAQALIGS PELVLLDEPT AGLDPANAKK VRELVKALSP
TTTFMISSHN LDELEKLCDQ VLYLDKGQLS QAVSMHASTD SDYLTLTMQS CDSDLLQAEV
AKLTGVVNVS SKQSKVFIIK LATDEEKAQS SDIEMRLFTL FNQHKWQYKM LLKGRTLEET
LFS
|
|---|
| |