| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2517 |
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| Symbol | |
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| ID | 7087053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2994411 |
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| End bp | 2996324 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461410 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002358434 |
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| Protein GI | 217973683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.977379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGATGCTCGT GCTGGGTACA ATGTTACTCA CTGGAGCCAA
GGTTTTTATG GGATCAGCGA TCACGGTGAG GTGACAGTGT CACCGGACCC AAAAAATCCT
GATTACAAGA TTGGCTTAAA TGAGCTAGCC AAAGACATGG TTAAAGCGGG CGTCGCTTTA
CCTGTACTAG TTCGTTTTCC GCAGATCCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAGAA GTACGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCCATT
AAAGTAAACC AACAGCAAAC TGTGGTGGAA GAGATCCTGG CGAGTCAGGC ATCAAAAGAA
GTACCACAAC TGGGTTTAGA AGCGGGCAGT AAGCCCGAGC TGATGGCTGT GTTAGCCATG
GCGCAAAAAG CCAGTTCAGT CATTGTATGT AATGGTTATA AAGATAATGA ATATATCCGT
TTAGCATTGA TTGGTGAAAA GTTAGGCCAC AAGGTTTACA TCGTTTTAGA AAAACTGTCT
GAACTGAAAA TGGTGTTAGC TGAATCTAAA CGTCTTGGTG TGACACCGCG TTTAGGTCTG
CGTGCGCGTT TAGCGTTCCA AGGCAAAGGC AAATGGCAGG CGAGCGGCGG CGAGAAGTCT
AAGTTCGGTC TATCAGCTGC GCAAATTTTG CTGGTTGTAG AGCAACTTAA GCAAAACGAT
ATGCTGGATT CGCTGCAATT GCTGCATTTC CATTTAGGTT CGCAAATCGC TAATATCCGT
GATATTCGCC AAGGTGTGAG TGAAGCGGGT CGTTTTTATT GTGAATTACG TGCATTAGGC
GCAAGCGTTA ACTGCTTCGA CGTCGGTGGT GGTTTAGCGG TGGATTACGA TGGCACACGT
AGCCAAAGTA ATAACTCGAT GAACTACGGC CTGACCGAAT ACGCCAACAA TATCGTTAAT
GTATTGACCG ACATCTGTAA TGAATACGAG CAGCCTATGC CACGTATTAT TTCAGAGTCT
GGCCGTTACT TAACCGCGCA CCATGCTGTG CTGATTACCG ATGTTATCGG TACTGAAGCC
TATCAGCCTG AAGATATACA ACCGCCAGCA GAAGAGTCAC CACAGTTATT GCATAACATG
TGGCATTCAT GGTCAGAGCT AAGCGGTCGC GCTGATCAAC GTGCTTTGAT TGAGATTTAT
CACGATAGCC AAAGTGACTT ACAAGAAGCG CATTCGCTAT TTGCTCTTGG TCAATTGAGC
TTGGCAGAAC GTGCGTGGGC TGAACAAGCT AACCTGCGTG TTTGCCATGA AGTGCAAGGA
CTATTGAGTG CGAAGAACCG TTATCACAGA CCTATCATTG ATGAACTCAA TGAAAAGTTA
GCCGATAAGT TCTTTGTTAA CTTCTCATTA TTCCAGTCAT TACCGGATGC TTGGGGTATT
GACCAAGTGT TCCCAGTATT GCCGTTATCG GGTTTAGATA AAGCCCCTGA GCGCCGTGCT
GTGATGCTTG ATATCACCTG TGACTCTGAC GGTATTGTCG ATCAATACGT TGATGGTCAA
GGGATTGAAA CCACATTGCC AGTACCAGCC TGGAGTGCGG ATAGCCCGTA CCTGATTGGT
TTCTTCCTTG TGGGCGCATA CCAAGAAATC TTGGGTGATA TGCATAACCT GTTTGGTGAT
ACTAACTCTG CAGTTGTTCG CATCGAAGAT AACGGTGTGA CTAATATTGA ATCGGTATTG
GCGGGTGATA CAGTCGCTGA TGTATTGCGT TACGTTAACT TAGATGCAGT GGCCTTTATG
CGCACTTACG AAGAGTTAGT GAATCTGCAT ATTGCCGAAG ATGAACGCGC ACAAATTTTA
GAAGAACTGC AAGTTGGCCT GAAAGGCTAC ACTTACTTGG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDDAR AGYNVTHWSQ GFYGISDHGE VTVSPDPKNP DYKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQQTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVTPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL LVVEQLKQND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAG RFYCELRALG ASVNCFDVGG GLAVDYDGTR
SQSNNSMNYG LTEYANNIVN VLTDICNEYE QPMPRIISES GRYLTAHHAV LITDVIGTEA
YQPEDIQPPA EESPQLLHNM WHSWSELSGR ADQRALIEIY HDSQSDLQEA HSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSAKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSADSPYLIG
FFLVGAYQEI LGDMHNLFGD TNSAVVRIED NGVTNIESVL AGDTVADVLR YVNLDAVAFM
RTYEELVNLH IAEDERAQIL EELQVGLKGY TYLEDFS
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