Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2446 |
Symbol | |
ID | 7089409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2919727 |
End bp | 2920752 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461339 |
Product | diguanylate cyclase |
Protein accession | YP_002358363 |
Protein GI | 217973612 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0209282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAG AGTTATTACA AGCCGCTGCA CTGAATCTCA AAAAAGCAGT GCCTCTGATG CTCAAACATA AAATTCCGAC CACCCCGGTT AACTATGCGC TTTGGTACAC TTATGTTGGT GAACAGAATC CCGAATTAAA TCAACGACTC GATACCGTTA TCGCCCAGTA CAACACTTGT CCTCCTGTGA GTAGCGAACT CTTATATCGC CAGTATGTTG CCGATCCCGT TGAACTCGAT GTCCGCGAAA TGCGCCAGAA TCTGGATGCT ATGGTGACTG AGCTGTCCCA ATCGCTCAAA GATACCAATC TAGATGCCAA TGAATTCCAG TCGCGCATCG AGAGTAATTT TGAAAAGCTC AACCGCATCG AAGATGAGGG TTTTAGTGTT GAGCAAGTGC TCGATCTGGT GCGCAGTTTA GTGAAAGAGT CGGACAATAT TCGCTCGAGC ACTGAGTTCT TTACCGGACA ATTGCAGAAA GCGCAAACCG AAATCGATGC GCTAAAGAAA AAGCTCGAAC AGACAGAAAA AGATGTGCTT TACGATGCGC TGACTGGCTG CTTTAATCGC CGCGCCTTCG ACAGCGATTT TGCCGGTATG TTGGCCCAAG CGCCCTTAGG CACCTGCTTG ATCTTGGCCG ATATCGACCA TTTTAAAGTG TTTAACGACA CCTATGGCCA CCAGCTCGGC GACCAAGTGT TACGCGCCGT GGCGAAACGG CTGCAGGAAT CCTGCCGCGA TGGCGCGAAA CTGTATCGTT TTGGCGGTGA AGAATTTGTG ATTATTGTGC CTAAAAGTCA GTTACGCATC GCAAGGCAAC TGGCCGAAGC CATGCGCCGT GGGCTCGAAA AGCTCAGTTT GAAAGACAGA CGTAAAGACG AGCGCATCAA TAATATCAGT GCCTCATTTG GGGTTGCCCA ATGGCAAGAA AAACAAACGG GCATGCAATT GATTGAAGCG GCAGATAAAT TACTTTATGA CGCTAAACGT TTAGGTCGAA ATCGCGTGTT ACCGATCAGC AACTAA
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Protein sequence | MSLELLQAAA LNLKKAVPLM LKHKIPTTPV NYALWYTYVG EQNPELNQRL DTVIAQYNTC PPVSSELLYR QYVADPVELD VREMRQNLDA MVTELSQSLK DTNLDANEFQ SRIESNFEKL NRIEDEGFSV EQVLDLVRSL VKESDNIRSS TEFFTGQLQK AQTEIDALKK KLEQTEKDVL YDALTGCFNR RAFDSDFAGM LAQAPLGTCL ILADIDHFKV FNDTYGHQLG DQVLRAVAKR LQESCRDGAK LYRFGGEEFV IIVPKSQLRI ARQLAEAMRR GLEKLSLKDR RKDERINNIS ASFGVAQWQE KQTGMQLIEA ADKLLYDAKR LGRNRVLPIS N
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