Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2427 |
Symbol | |
ID | 7089390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2900199 |
End bp | 2901308 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643461321 |
Product | ribonuclease D |
Protein accession | YP_002358345 |
Protein GI | 217973594 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000162598 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.100948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC AAGTTAGGTT TGATACAAGC TTATGATGGT AAAACCTTAG CTTTGATTGA TCCTGTGGCT TTACCTGATT TAGCCCAGTT TTGGGCGCTG TTATCGGACC CGAATATCAT TAAGTTAGTG CATTCCTGCA GTGAAGACTT AGAAGTGTTT GCCCATTATG GTAAATGTCA GCCTACGCCT TTGTTTGATA GCCAAATTGC AGCTTCTTTG TGTGGAATGG GCCATGGTGT AGGTTATGCA AAGTTAGTTG AAACTTGCCT TGGTGAAGTG ATCGATAAAG GTGAGTCACG TACCGATTGG ATCCGCCGCC CTTTAACGGA AGCACAGTTA AGCTACGCCG CGAATGACGT CTTGTACTTG TATCAGCTCT ATCCTCAACT TGAAGCGAAA CTCAGCGCCC AAGGGCGTTT AGCTTGGTTA TACGAGGAAG GGGAAAGGAT GACCCAGGGC AGGCTTGCCG ATCCTGATCT CGACACGGCT TATTTGAAAG TGAAAAATGC TTTCCAACTG ACTGAAATCC AATTGGCTTA CCTTAAAGTG CTTGCTAAGT GGCGTCTTGA AAAAGCTTTA GTGCGTGATT TAGCTCTAGG TTTTGTGGTC AAAGATCATG GTCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC CGACTTGTTT AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GAAAAGATTT ATTACGTGTG CTGCAAACCG CTGATTTGGT CAATTTACCC GAATTAGTGG ATGTGTTGGC GTTAAAATCA GGCTACAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG CGAACAGCAT GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGTCATATCC ATGAGTTTTT GCAATGGCGT TGGGATAAGC AACAAGGGGA TTTGCCTGCG GTGTTATGCG GATGGCGGGG CGAGATTGCC GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
|
Protein sequence | MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA LPDLAQFWAL LSDPNIIKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL YEEGERMTQG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA AESLAKLEV
|
| |