| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2422 |
|---|
| Symbol | |
|---|
| ID | 7089385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2896765 |
|---|
| End bp | 2897877 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643461316 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_002358340 |
|---|
| Protein GI | 217973589 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000759063 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00536739 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGAT ACCGTACTTA TCTAACCCAA GCTTATCAAA CCAATGCTTT CCCAGTTAAG
GTTTGTCACT TTGGGGTTTA TCAGAATAAG CTTTATCGAC TTGCAGCATA TATCTTCGCT
CCCATCAGGG TATTTGTCTG TTTCATCATT TGGCTGAGTG CGTGCAGTTT GCCAGCCATG
GCGCAGCAGC CGGATGAGAA AATCAGCTTT AGTGATTATT TAATTCAGTT AAAGCAAGAA
GCCCGTCTTC AGGGCATCAG CCAAACGACC TTAGATTTAG CCTTTCCCCA GATCAAACTC
TTCAAAAAAG CCCGAGCGAC AGACAGCCAC CAGACAGAAA AAACTCACAA CCTCGATACT
TATCTCGCCG ACACTGTGCC CGAGTGGAAA GTTGACACCG CACGTGTGCT GTTTAAAGAG
CATGAACAAC AACTCAAAGC CATCGCCAGC CAATACGCTG TTCAGCCACG CTTCTTAGTC
GCGCTCTGGG GGCTTGTCTC CGACTTTGGT GAAGCTTCTG GCGATTATCC TGCGCTATCT
GTGACGGCGT CACTGGCCTT TGGCGGCGAG CGCGAAGCCT TCTTCAAAAA AGAGTTTATG
GCTGCACTCA GCATAATGGA TAAAGATCAT ATCGGTTTTC AAGATCTTAA AAGTCGTTGG
AATGGCGCCA TGGGACAAAC GCAGCTGATG CCAACGGATT ATCTTGCCTA TGGGCAGGAC
GGCGATGGCG ACGGTAAGAA AGACATTTGG CACAACACAC AAGATGCGTT TGCCTCCGCG
GCGTATTTGC TACAGCAACT CGGTTGGAAC GGCGATGATA CTTGGGGCCG ACAAGTACAA
GTGCCTGCAA CACTTGATTT GGCCGTCGCT GGATTAGATA AACCCCAGTC CTTAGCCCAG
TGGCAAACTC TCGGTATTCG CAAGTTTGAT CATACCGATT TGCCGTCCCG CGAAGACATC
AACGCCTCGC TAATCATGCC CGATGGTGTT ACCGGTCGAA AATACCTCGT TTATGGCAAT
TACCGCGCAT TAATGCACTG GCAGAATACC GATTATTTCG GGATTTCTGT CGCGCATCTG
TCCGAGAGAA TAAAGTATCC GCCGATAAAC TAG
|
|---|
| Protein sequence | MHRYRTYLTQ AYQTNAFPVK VCHFGVYQNK LYRLAAYIFA PIRVFVCFII WLSACSLPAM
AQQPDEKISF SDYLIQLKQE ARLQGISQTT LDLAFPQIKL FKKARATDSH QTEKTHNLDT
YLADTVPEWK VDTARVLFKE HEQQLKAIAS QYAVQPRFLV ALWGLVSDFG EASGDYPALS
VTASLAFGGE REAFFKKEFM AALSIMDKDH IGFQDLKSRW NGAMGQTQLM PTDYLAYGQD
GDGDGKKDIW HNTQDAFASA AYLLQQLGWN GDDTWGRQVQ VPATLDLAVA GLDKPQSLAQ
WQTLGIRKFD HTDLPSREDI NASLIMPDGV TGRKYLVYGN YRALMHWQNT DYFGISVAHL
SERIKYPPIN
|
|---|
| |