| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2413 |
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| Symbol | |
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| ID | 7089376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2886680 |
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| End bp | 2887819 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461307 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002358331 |
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| Protein GI | 217973580 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.430044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000120097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGAAC TAAAACACCT CTATCAAGGC TTTCGCGATC CCCAAACGAT TACCAATTTA
GCGCGTGATA TTCAGTTAAC CGCTAAATTG GTTAAGCAAC AAATCAATAT CATGGAAGTC
TGTGGCGGCC ATACCCACAC TATTATGAAA TACGGCTTGC TGGATTTACT GCCTGATAAC
ATTGAGTTTA TCCACGGTCC AGGTTGTCCT GTGTGCATTA TGCCGAAAGA GCGCATTGAC
CAAGCGGCGG CGCTGGCCTC CCAAGAGAAT GTCATCTTAG TGACGCTGGG CGATATGATC
CGTGTGCCTG GTTCTAAGGG TTCCTTAGCC AGTTTTAGGG CGAAAGGCTG TGATATTCGA
CCGATTTATG ATCCCTTAGA TACGCTCAAA ATTGCTCGAG ATAATCCCGA TAAAACCGTG
GTGTTCTTTG CCATCGGCTT TGAAACCTCA ACCCCAATGA CAGCGATTTT ATTGCAACTG
GCCGAGCACA AAAAACTCGA GAATCTGTTA TTCCATATTA ATCATGTATT AGTGCCGCCC
GCGATTGATG CCGTGATGCA CGACCCGAAA GCGAGGGTGA ATGCCTTTAT CGGCCCCGCC
CATGTGAGCG TGATCAGCGG CGCCAAAATC TATCGCAGCA CAGTCGAAAA CTATGGCACG
CCCGTGGTCG TCGCAGGATT TGAACCCGTT GATGTGATGG AGTCTATTTT ACGGATTGTG
CGCCAAAAAG CCGCGGGCAA AGCGGAGCTC GATATCCAAT ACAGCCGCGC GGTATCGGAG
GACGGTAACC TCACGGCGCA GGCCAAAGTG AATCAATTCT TCAATATCAG ACCGCAATTT
CGCTGGCGCG GCCTCGGTCC TATCCCCAAT TCAGCGCTGC AGCTCAAACC CGAATATGCC
CACAGGGACG CCGAACTGCG CTTTAAAGAC TGCTTACCCG TAAAGGAAAT TGACGATCAC
AAAGCCTGCC AGTGTGGCGA CATTCTTCGT GGGCTTGCTA AACCAAAGGA CTGTAAAGTT
TTTGGCCGCG GCTGCAATCC CGAAACGCCC TTAGGCAGCT GCATGGTCAG CTCCGAAGGC
GCTTGCAACG CCTATTACCG CTATCAAGGT ATCGATATCA AGGAGCCACA TCATGGCTGA
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| Protein sequence | MLELKHLYQG FRDPQTITNL ARDIQLTAKL VKQQINIMEV CGGHTHTIMK YGLLDLLPDN
IEFIHGPGCP VCIMPKERID QAAALASQEN VILVTLGDMI RVPGSKGSLA SFRAKGCDIR
PIYDPLDTLK IARDNPDKTV VFFAIGFETS TPMTAILLQL AEHKKLENLL FHINHVLVPP
AIDAVMHDPK ARVNAFIGPA HVSVISGAKI YRSTVENYGT PVVVAGFEPV DVMESILRIV
RQKAAGKAEL DIQYSRAVSE DGNLTAQAKV NQFFNIRPQF RWRGLGPIPN SALQLKPEYA
HRDAELRFKD CLPVKEIDDH KACQCGDILR GLAKPKDCKV FGRGCNPETP LGSCMVSSEG
ACNAYYRYQG IDIKEPHHG
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