Gene Sbal223_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2406 
Symbol 
ID7089369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2877975 
End bp2878649 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID643461300 
ProductNi/Fe-hydrogenase, b-type cytochrome subunit 
Protein accessionYP_002358324 
Protein GI217973573 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0991035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000275557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCATT CTGCAACCCG CATTCGGACA CTGGTTTTTA GTCCGGCAAT ACGGATTTTC 
CACTGGCTCA GGGCACTATC AATTTTAGTG CTAGTGATCA CCGGATTCTA TATTACTTGG
CCGTTTCTTG TGGCGCCTGA AAGTACGGAT GTGCTCGTAC AAGGCTGGAT CCGCTTCGCT
CATTTGATCT GCGGTTTTGT ATTGACCGCC ATCACCTTAG TCCGCTTCTA CCTGTATTTT
TTCAGTCGAA GCGACATTGA GCGGCGATCA TTTCGCGATG TGATGAGTGT AAAAAGCTGG
ATCACTCAGC TGAAATCTTA CTTATGGATG GGTCACTTAC ATAAAGCGGG GGTATATGGA
CCGCTGCAAT TTGTGACTTA TGTAGCAATC TCATTGGTCG CTCTCGTGAT ATGTATAACG
GGTCTGGTGT TGTACGCCAA TGTGTATCAC CAAGGTTTAG GTGGGATGCT TTGGGGCAGC
GCCGCTTGGA TTACGGCACA AATGGGTGGG CTGGCACAGG TTAGGATTTT CCATCACTAC
TTAACTTGGG CATTTGTTAT CTTTGTGGTT ATCCACGTCT ATATGGCGGT TTGGTCAGGG
ATACGCTTCA AACATAACTC AGTTGACTCG ATTGTCTCTG GCTATGACTA CCCAAAGCCA
GACTCACACC ACTAG
 
Protein sequence
MNHSATRIRT LVFSPAIRIF HWLRALSILV LVITGFYITW PFLVAPESTD VLVQGWIRFA 
HLICGFVLTA ITLVRFYLYF FSRSDIERRS FRDVMSVKSW ITQLKSYLWM GHLHKAGVYG
PLQFVTYVAI SLVALVICIT GLVLYANVYH QGLGGMLWGS AAWITAQMGG LAQVRIFHHY
LTWAFVIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYPKP DSHH