| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2386 |
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| Symbol | |
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| ID | 7089349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2847868 |
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| End bp | 2851743 |
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| Gene Length | 3876 bp |
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| Protein Length | 1291 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461280 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_002358304 |
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| Protein GI | 217973553 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.473079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.224291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACTCAG ACAAACATCC TCTATCGAAC GCCTTTCTTA ATCTTTGTTA TCAGGCTGAT
GCGTCTAGGA TCCGTCGTCG TTTATTTAAA CTCAATAAAG AAGCCGACTC AGATAAAAAG
ACCCAAGTCT TAGCCCAACT GAGTGAGCAA GCGCAGGCGG CGTTTGAGAA GGTTGAGCAG
CGACGTAACG CTCGCCCTAA AATCCAATAT CCTGAAAACC TTCCCGTTTC TTTGATGCGT
GATGACATTG CACGCGCGAT TGCGGGCAAT CAAGTGGTGA TCATTGCCGG TGAAACGGGC
TCGGGTAAAA CCACGCAGCT CCCCAAAATT TGTTTAGAAC TCGGCTTAGG TTGCCGTGGC
ATCATAGGCC ACACCCAGCC AAGACGATTG GCTGCCCGCA GCGTGGCGAG CCGAGTTGCT
GAAGAATTAC AAAGCCCGCT CGGTGAAGTG GTCGGCTTTA AAGTGCGGTT TGCCGATGCG
CTTAAGAGTG ACTCGTATAT TAAGTTGATG ACCGACGGTA TTTTACTGGC GGAATTGACC
TCAGATCGCA ATCTCGACCA ATACGATACC ATCATCATAG ATGAGGCCCA CGAGCGCAGC
CTGAACATCG ATTTTATTCT GGGCTATCTT AAACAGATCC TTAAAAGACG CCCCGATCTC
AAAGTTATTA TTACGTCGGC GACCATAGAC GTTGAGCGTT TTTCTAAGCA TTTCAACAAT
GCGCCGATTA TCGAAGTGTC GGGTCGTACC TTTCCGGTCG AAACCCGTTA TCGTCCATTG
GTGCAAGATA GCGATGCCGA TTTAGATCAA ATCGAAGGCA TTTTTGCCGC CGTCGATGAG
CTGGTGGCCG AAGGGCTGGG CGATATTCTG ATCTTTATGA ACGGCGAGCG AGAAATTCGC
GATACAGCCG AGCAATTGAG CCGACGTAAT TACCGCGATA CCGAAATTTT GCCGCTGTAC
GCACGTTTAT CCTATGGCGA GCAGTCCAAA GTCTTCAGTA GTCACAGAGG TCGGCGGATT
GTACTAGCGA CGAACGTGGC GGAAACTTCG CTGACTGTGC CGGGCATTCG CTACGTTATC
GACCCAGGTA CAGCGCGTAT CAGCCGTTAT AGTTATCGCA CTAAGGTGCA ACGTTTACCG
ATAGAACCTA TCTCGCAGGC GAGCGCCAAT CAGCGCCAAG GCCGTTGTGG TCGTGTGGGA
CCGGGTATTT GTATTCGTTT GTACGATGAG GCGGATTTTA ATAATCGTCC GGCGTTTACC
GATCCTGAAA TTTTGCGCAC TAACTTGGCC TCGGTTATTT TGCAGATGCT CGCCATCGGT
TTGGGTGATA TCGCTGGCTT CCCGTTTATC GAGCCACCCG ATCCACGCCA TATCCGCGAT
GGTTTTTTGC TGCTCGAAGA ATTACAAGCG GTTGAGAGCA AACACGGCAA GCTAGTATTG
ACGCCACTTG GGCGCAACTT GGCGCAAATT CCTGTGGATC CGCGTTTGGC GCGTATGGTG
GTCGAGAGTC AGCAGTTAGG TTGTTTGAAC GAAGTGCTAG TGATTGCTGC GGGCTTATCG
ATTCAAGATC CCCGCGAACG CCCGATGGAG AAGAAGCAAG CCAGTGATGA AGCCCATCGT
CGTTTTGCCG ATCCCAGTTC CGATTTCGTC AGTTGGATTA ACCTTTGGCA GCACTTAAAA
GATCAGCAAA AAGAGTTATC TGCTAGTCAG TTCCGTAAAA AATGCCGCGA TGAGTATTTG
GCCTATTTGC GCGTTCGCGA GTGGCAGGAT TTATACGCCC AGCTTAAACA AGCCGTACAC
GATTTAAAAT GGCGCTTAAA CGATACGCCG CCAAGTTACG ATACCTTGCA TCGTGCGCTG
TTGTCGGGTT TGTTGAGCCA TGTTGGTTTT AAAGATAACA ATAACGAGTA TTTAGGTGCG
CGTAATCGTA AATTCTTTGT GTTTCCCGGT TCGCCATTGG CCAAAAAAGG CCCTAAGTGG
ATCATGGCCG CTGAGCTTAC CGAAACTTCG CGCTTATTCG CTCGCTGCTG CGCTAAAATC
GAACCCGAAT GGCTAGAGCC CTTAGCGGCG CATTTGATTA AGAAAAGCTA TGTAGAGCCC
CATTTTGAGG CAAAACCTGG CAGCGTTATC GCCCTTGAGA ATCAAGTGCT TTATGGTTTG
ACGGTCGTGC ACCGCCGCAA AGTGCAATAC GGCCCCATCG ATCCTGTTGA AGCGCGTGAG
ATTTTTATCC GCAGCGCCTT GGCAGAAGGG CAGTTGCAAA CCCAAGAAGC GTTTTTTGTC
GCTAACCAAA AGCTGCTCGA AGACATTGAA TCCCTCGAGC ATAAATCCCG TCGCCGCGAT
ATTTTGGTGG ACGAGCAAGT GTTGGTGGAT TTTTACGAGC CGCGGATCCC TGAGGGGATT
TACAACGCCC AGCTATTTTT GGGCTGGTGG AAGAAAGCCA AGCGCGAGCA ACCGGATTTA
CTCGATTTCA GCAAAGCGCT GTTAATGCAA CGCAATGCTG ACCATATTTC GACCTTGGAT
TTCCCCGATA CATGGCACAA GGGCAATTTG CGCCTGCAGC TGAGTTATCA CTTTGAACCC
GCCGCGGCGG ATGACGGCGT GTCGGTGCAC ATTCCGGTGG CGCTGCTGAA TCAAATCGAC
GATAGCGATT TTGATTGGTT GGTGGCGGGG CTGAGGGAAG AAAAGTGCAT CGCGCTGATC
AAATCTTTGC CTAAGAGTTT ACGACGTAAC TTTGTGCCAG CGCCTGACTA TGCCCGCGCT
TGTGTGCAGG CCATGGTGCC TTTTAGTGCC AGTTTGCTTG AAGCCATGTG CAAGCAATTG
CTGCGCATGA GTGGCACGCG CATAACGCCG GAAGATTTTG ATTTAACGCA GATCCCCGCG
CATTTGCAGA TGAACTTTAA AATCGAAGAC GATAAAAACA ACTTAGTCGC CGAAGGTCGG
GTGCTCGATA CCTTAAAAGC CGAGTTGCAG GGCGTGGTGG CGAAGGCCAT TCGTCAGGTG
GCGGATAAAG GTATAGAGCA AGAAGCGTTA ACTGAGTGGT CCTTTGGTGA TTTGCCGCAG
CAATATCAGC AGCAAAAAGG CAATTACCAA GTACGGGCGT TTCCGGCGCT GATCGATAAA
AAAGACAGTG TTGCGATCAA ATTATTTGAT GATGAATTTG AAGCCTTAGA TGCCCATCGC
CAAGGTCTGC GACGCTTGTT GCTGTTAAAC ATTCCATCAC CGGTAAAACA TTTACAGCAA
GCTTTGCCGA ATAAGGCGAA ATTGGCGATG TATTTCAATC CCTTTGGTCA AGTACAAATC
TTGATTGATG ACATTATTGC CGCCGCTGTA CAGCAATTAT TGGATGAAAA AGCCCTCGAT
GTGCGTAATC AAGCCCAATT TGAGCAGGCA AAGGATTGGG TTCGCCAAGA GCTCAACCCG
ACCGCCGAGC AAATTGCCCT GAAGGTTGAG CAGATTTTGA CCTTATACCA GAGCATTAAA
AAGCGTCTCA AGGGCAAAAT TAGCTTAGAT ATCGCTTTTG CTATGAGTGA TATTCAAAGC
CAATTAGACA AATTAGTGTT TAAAGGGTTT GTTGAATCCT GCGGTTGGAA TCGTTTAGCC
GATGTGGCGC GTTACTTAAA AGCGATTGAA ATCCGTGTCG AGAAGTTACC TGTCGATCCA
ACTCGCGACC GTTTGCATAT GCAGAGTATT AACAAGGTGC AGGAAGCATT GAATGCACAA
TTGGCGAAAG TGCCACGTTC TATGCCGACA CCGCCCGCGT TAATTGAAGC GCGCTGGATG
ATTGAAGAGT ATCGTGTCTC CTGTTTTGCG CAGGTGTTAG GCACGGCTTA TCCGATATCG
GAAAAACGCA TTTTGAATCA TATCCAACAG GTCTAA
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| Protein sequence | MNSDKHPLSN AFLNLCYQAD ASRIRRRLFK LNKEADSDKK TQVLAQLSEQ AQAAFEKVEQ
RRNARPKIQY PENLPVSLMR DDIARAIAGN QVVIIAGETG SGKTTQLPKI CLELGLGCRG
IIGHTQPRRL AARSVASRVA EELQSPLGEV VGFKVRFADA LKSDSYIKLM TDGILLAELT
SDRNLDQYDT IIIDEAHERS LNIDFILGYL KQILKRRPDL KVIITSATID VERFSKHFNN
APIIEVSGRT FPVETRYRPL VQDSDADLDQ IEGIFAAVDE LVAEGLGDIL IFMNGEREIR
DTAEQLSRRN YRDTEILPLY ARLSYGEQSK VFSSHRGRRI VLATNVAETS LTVPGIRYVI
DPGTARISRY SYRTKVQRLP IEPISQASAN QRQGRCGRVG PGICIRLYDE ADFNNRPAFT
DPEILRTNLA SVILQMLAIG LGDIAGFPFI EPPDPRHIRD GFLLLEELQA VESKHGKLVL
TPLGRNLAQI PVDPRLARMV VESQQLGCLN EVLVIAAGLS IQDPRERPME KKQASDEAHR
RFADPSSDFV SWINLWQHLK DQQKELSASQ FRKKCRDEYL AYLRVREWQD LYAQLKQAVH
DLKWRLNDTP PSYDTLHRAL LSGLLSHVGF KDNNNEYLGA RNRKFFVFPG SPLAKKGPKW
IMAAELTETS RLFARCCAKI EPEWLEPLAA HLIKKSYVEP HFEAKPGSVI ALENQVLYGL
TVVHRRKVQY GPIDPVEARE IFIRSALAEG QLQTQEAFFV ANQKLLEDIE SLEHKSRRRD
ILVDEQVLVD FYEPRIPEGI YNAQLFLGWW KKAKREQPDL LDFSKALLMQ RNADHISTLD
FPDTWHKGNL RLQLSYHFEP AAADDGVSVH IPVALLNQID DSDFDWLVAG LREEKCIALI
KSLPKSLRRN FVPAPDYARA CVQAMVPFSA SLLEAMCKQL LRMSGTRITP EDFDLTQIPA
HLQMNFKIED DKNNLVAEGR VLDTLKAELQ GVVAKAIRQV ADKGIEQEAL TEWSFGDLPQ
QYQQQKGNYQ VRAFPALIDK KDSVAIKLFD DEFEALDAHR QGLRRLLLLN IPSPVKHLQQ
ALPNKAKLAM YFNPFGQVQI LIDDIIAAAV QQLLDEKALD VRNQAQFEQA KDWVRQELNP
TAEQIALKVE QILTLYQSIK KRLKGKISLD IAFAMSDIQS QLDKLVFKGF VESCGWNRLA
DVARYLKAIE IRVEKLPVDP TRDRLHMQSI NKVQEALNAQ LAKVPRSMPT PPALIEARWM
IEEYRVSCFA QVLGTAYPIS EKRILNHIQQ V
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