| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2375 |
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| Symbol | |
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| ID | 7089338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2836428 |
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| End bp | 2837972 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461269 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_002358293 |
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| Protein GI | 217973542 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0191721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.43725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTA ACCATGAAAT GTCTGTCAAT TCTGTGATTA AGCAAGCCGA CTTAATTGAA
AGTGTGGCGG ATGCTTTGCA ATACATCTCT TATTACCACC CGAAGGATTT TGTTGATGCC
ATGAGCCAAG CTTATGAGCG TGAACAAAGT GCGGCGGCGA AGGATGCCAT TGCCCAGATC
TTAATTAACT CGCGTATGTC GGCCGAAGGC AAGCGTCCTC TGTGTCAAGA CACTGGGATT
GTCACCACCT TCGTTAAAGT GGGTATGGGT GTCCAATGGG ACAAAACCGA TATGACAATT
CAGGAAATGG TCGACGAAGG TGTTCGTCGT GCCTATACCA ATCCTGATAA CCCACTGCGT
GCATCAATAG TGTCAGATCC TGCGGGCAGC CGTAAAAATA CCAAAGATAA CACGCCATCT
GTGGTGCATA TCGACATGGT GCCAGGCAAC CATATCGAAG TGGCGATTGC AGCTAAAGGC
GGTGGCAGTG AAAACAAAGC TAAGATGGTG ATGTTAAACC CATCAGATGA TATCGCCGCT
TGGGTAGAAA AAACGCTACC GACGATGGGC GCAGGCTGGT GTCCACCGGG TATGCTGGGT
ATCGGCATTG GCGGCACGGC AGAAAAAGCC GCCGTATTAG CCAAAGAAGC GCTGATGGAA
AGCGTGGATA TCCATGAGTT GATGGCCCGT GGCGCGCAAA CGACCGAAGA AAAGCTGCGT
TTAGATATTT TTGAGCGCGC GAACAACTTA GGCATAGGTG CCCAAGGTCT TGGCGGTTTA
ACCACAGTGT TAGACGTTAA AATCAAATCG GCGCCCACCC ACGCGGCTTC AAAGCCTGTG
GTGATGATCC CTAACTGTGC AGCGACTCGC CACGTACATT TCCATTTAGA TGGCTCAGGT
CCAGCTGAAT TGACGCCACC ATCATTGTCA GATTGGCCAG AAATCACCCG TGAAGTGGGT
GATGATGTGC GCCGTGTTAA CTTAGATACT GTGACTCAAG CGGATATCGA GCAGTGGCAG
AGCGGTGAAA CTATTCTGCT GAGCGGTAAA ATGCTCACAG GTCGTGATGC GGCCCATAAG
CGCATTCAAA GCCTAATCGA AAGTGGTGAA GGTCTGCCAG AAGGCGTGGA CTTTACGGGT
AAATTTATTT ACTACGTTGG CCCCGTTGAT CCAGTGGGTA CTGAAGTTGT CGGTCCTGCG
GGCCCAACTA CGGCAACCCG TATGGATAAA TTCACTGACT TAATGTTAGA AAAAACAGGC
TTGATGGGTA TGATAGGTAA AGCTGAGCGC GGCCCTGCGA CAGTTGAATC GATCAAAAAA
CACAAAGCGG TATATCTTAT GGCCGTTGGC GGCGCTGCGT ATTTAGTGTC AAAAGCGATT
AAACATTCTC GCGTCGTGGC CTTTGCCGAT TTAGGTATGG AAGCGATTTA CGAGTTTGAC
GTGCAAGATA TGCCAGTGAC TGTGGCTGTG GATTCAAATG GCGTGAACGC CCATGAAACT
GGCCCAGCAA TTTGGAAAGT GAATATCGCC AACGCGAAAG CCTAA
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| Protein sequence | MSSNHEMSVN SVIKQADLIE SVADALQYIS YYHPKDFVDA MSQAYEREQS AAAKDAIAQI
LINSRMSAEG KRPLCQDTGI VTTFVKVGMG VQWDKTDMTI QEMVDEGVRR AYTNPDNPLR
ASIVSDPAGS RKNTKDNTPS VVHIDMVPGN HIEVAIAAKG GGSENKAKMV MLNPSDDIAA
WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAQTTEEKLR
LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGSG
PAELTPPSLS DWPEITREVG DDVRRVNLDT VTQADIEQWQ SGETILLSGK MLTGRDAAHK
RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGTEVVGPA GPTTATRMDK FTDLMLEKTG
LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KHSRVVAFAD LGMEAIYEFD
VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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