| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2357 |
|---|
| Symbol | |
|---|
| ID | 7087771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2814421 |
|---|
| End bp | 2814903 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643461253 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_002358277 |
|---|
| Protein GI | 217973526 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.162482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATTT CAACATTAAC CCACCGTAAT CAACTCGACT CTTCAGACTC AGTTATCAGG
GAAGCCATTG CTATCTTGGA GAGTCGCTAC ACCCTGCAAG CTAATCCGCA GGCATTCACC
TCTCCACAAC TGGTAAAAGA CTATCTTCGA CTGAAAATGG CTGGATACGA GCGGGAGGTA
TTTGCGGTAT TGCTACTGGA TAGCCAGCAC CGTTTGATTA GTTGTGAAGA ACTCTTTTTC
GGCACTATAG ATGCCGCCTC AGTATATCCT CGTGAGGTGG TAAAAATAGT TCTGCATAGA
AACGCCGCTG CCGTGATATT CGCCCACAAC CATCCCTCAG GCATGCCTGA ACCCTCAGAG
GCCGATAAAC GCATTACAGA GCGTTTAAAG ACAGCCTTGT CAACTATTGA TGTATCAGTG
TTAGACCATT TTGTTGTTGG TCATCAAGAT GTCGTTTCGT TTGCTGAAAG GGGATGGTTA
TGA
|
|---|
| Protein sequence | MLISTLTHRN QLDSSDSVIR EAIAILESRY TLQANPQAFT SPQLVKDYLR LKMAGYEREV
FAVLLLDSQH RLISCEELFF GTIDAASVYP REVVKIVLHR NAAAVIFAHN HPSGMPEPSE
ADKRITERLK TALSTIDVSV LDHFVVGHQD VVSFAERGWL
|
|---|
| |