| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2310 |
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| Symbol | |
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| ID | 7087724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2757340 |
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| End bp | 2758566 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461208 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_002358232 |
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| Protein GI | 217973481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.151652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0277936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA TAGTGATAAA AAACCTGTAT AAGGTTTTTG GTGCTGAGCC TCGCAAGGGG
GTGAAGTTAC TTGAACAAGG GAAAAGCAAA GAAGAAATTT ACGAACAGAC AGGGCTGACG
GTTGCCGTAC AAGGTGCCAG CTTTAGCGTA AATAAAGGTG AGATTTTTGT GGTTATGGGG
CTATCCGGCT CAGGAAAATC AACCTTGGTA AGAATGTTAA ACAGGCTCAT TGAACCCACG
TCGGGAGAGG TATTAGTCGA TGGCCAAAAT ATCCTCAACA TGAATAAGGA TGAACTGGTC
AGGTTTCGCA GAAGTAAAAC CAGTATGGTG TTTCAATCCT TCGCGCTTAT GCCCCATCAA
ACAGTGTTAG AGAATGCCGC ATTTGGCCTC GAACTCGATG GCATGGATAA AAAACAGCGT
GAAGAACGAG CCCTAGATGC TTTAAAACAA GTCGGACTCG AAGGTTTGGA GAAGGCCTAT
CCCAATGAGT TAAGTGGGGG TATGCAGCAG CGAGTGGGAT TAGCGCGAGG CTTAGCGGTT
GATCCTGATA TCTTGCTCAT GGATGAGGCA TTTTCGGCGC TTGATCCGCT TATCAAGACA
GAGATGCAAG ATGAACTGCT GAAACTGCAA GATCGTCATG AACGCACCAT CATTTTTATC
TCCCATGATT TAGACGAAGC ATTACGGATT GGCGACCGAA TTGCCATTAT GCAGGGCGGC
AGAGTGATTC AGGTGGGGAC GCCGGAAGAG ATCCTGCAAA ATCCCGCAGA TGATTATGTA
CGTGCATTTT TCCGTGGTGT GGATCCAACC GGTGTTATCT CCGCTGGGGA TATTGCCCGC
GACAGTCAGC CAACGGTCGT TTGGCATACT AAAGCCGGTA GCCCACGCGC CACCCTAGAA
ATGTTAAGCA TTAAAGATCG CGAATTTGCC TATGTACTTG ACTCAGAACA CCGCTTTTTA
GGTGTGGTCT CTTCAGACTC CCTGCGCGAC GCTGTTGACC AAGGAAATGG TGCCAGCAAA
CTTGAGCATG CTTTTCTGAC AGACGCTAAA TCAGTTCAAG AAACAGATAG TCTTCAGGAT
ATCTTACCCT TGGTCGCCTC CCATGCTTGG CCTATTCCAG TTGTAAACTC AGAAAGTAGA
TATCGCGGCG TTGTTTCTAA AAATCTGTTT CTTCGTACCT TAAACCGTGC GGAAAAGGGG
ACCTATTTTG AGCAGTCAGC ATCTTAG
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| Protein sequence | MEKIVIKNLY KVFGAEPRKG VKLLEQGKSK EEIYEQTGLT VAVQGASFSV NKGEIFVVMG
LSGSGKSTLV RMLNRLIEPT SGEVLVDGQN ILNMNKDELV RFRRSKTSMV FQSFALMPHQ
TVLENAAFGL ELDGMDKKQR EERALDALKQ VGLEGLEKAY PNELSGGMQQ RVGLARGLAV
DPDILLMDEA FSALDPLIKT EMQDELLKLQ DRHERTIIFI SHDLDEALRI GDRIAIMQGG
RVIQVGTPEE ILQNPADDYV RAFFRGVDPT GVISAGDIAR DSQPTVVWHT KAGSPRATLE
MLSIKDREFA YVLDSEHRFL GVVSSDSLRD AVDQGNGASK LEHAFLTDAK SVQETDSLQD
ILPLVASHAW PIPVVNSESR YRGVVSKNLF LRTLNRAEKG TYFEQSAS
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