| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2307 |
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| Symbol | |
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| ID | 7087721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2751724 |
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| End bp | 2753460 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643461205 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_002358229 |
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| Protein GI | 217973478 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.401078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.110885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA ACGTAGCGGA TCATCTAGTC GAAATGCTGG TAGAAGCGGG TGTTAAGCGA
GTTTATGCCG TGACTGGCGA TAGCCTTAAT CCGGTCAACG ATGCAGTGCG AAGGGATGGC
AGACTGCAAT GGATCCATGT TAGGCACGAG GAAGCTGGCG CCTATGCGGC ATCTATGGAA
GCTGAGCTAA ATGGTATCGG TTGTTGCATG GGCAGCAGTG GTCCTGGGCA TGTTCATTTA
GTCAATGGAC TCTATGATGC CAATAGAGCT GAAAATCCGG TTATTGCGAT TGCTTCAACT
ATTCATACTG AAAAAATGGG CCTGGACAAC TTTCAAGAGA CAAGACCCGA AGCGTTATTT
CAAGATTGCT CAAAATATGT ATTTCTCGCC AATACCCCTA AACAAGCTGT CAATGGTTTG
CAAACCGCGA TTCAGCATGC CATCAGCAAG AAAGGGGTCG CAGTGCTCGG GCTTCCCGGC
GATGTGGCTT CAGCAAGTCT GGAATCTGTG CATACGGCGA ATAAAAACTT CTATACCCAA
CCCAGAATAA CCCCAAGCAA TGAACAGCTT CTAGAACTGG CAAGCGTGAT TAATGAACAT
GAAAAAGTGA TGCTGTTTTG CGGCCATGGC TGTCGCTATG CCGTTGAAGA AGTGATGGCA
TTGGCCAAAA GGCTTAATGC CCCGTTGGGA TATAGCTTTC GAGGCAAAAT ATTTTTTGAA
CGTAAAGAAA ATCCTTATGC CGTTGGATTA AATGGGCTTT TAGGCAATAA ATCCGGTTTT
GAAGCCATGC ATCAAGCCGA TGTTCTGTTG ATGCTGGGCA CGGATTTTCC ATATAGTGAG
TTCCTTCCCG AAAAATGCAA AATTATTCAA ATCGATACTA AACCCGAAAA ATTAGGCCGT
AGAGCTAAAG TGGACTTGGG TTATTGTGGT GATATTAAAT CAACCCTTGA AGATCTTATG
CCGTTAATTG ATGTCAAAAC GTCCACGGAT TTTCTCGACA AAACCCGTTC ACTGCATCAA
GAAATTGAAG CTATCTATGA GAGCTATGTG GAAGAAAAGG GTTCTGAAAA AAATATTCAC
CCAGAATATG TTGCCCATTT GGTGGATAAA CTCGCCGATG ACGATGCGAT ATTTACCGTT
GATACGGGGA TGAGCGCCGT GTGGGCCGCG CGTTATTTAA AGGCGGGAGC CAATCGCTAT
CTGACCGGCT CCTTTAATCA TGGCTCAATG GCGAATGCCA TGCCTATGGC GATGGGGGCT
GGTTTATCAC AACCAGACCG GCAAGTGATT GCGTTTTGTG GCGATGGCGG TATTTCAATG
CTGCTCGGCG ACTTAATGAC CATTAGCCAA TATCAAATTC CTGTCAAAAT CATCATCTTT
AATAATCGTT CGTTAGCTAT GGTGAAACTT GAAATGCGGG TAGAAGGTTA TATGGAGTGG
CAGACGGATA TGGTTAATCC TGATTTTATA AAATTGGCAG AGGCGATGAA CATTGCTGCA
TGGGAGGCGA CGGAGTCCAA AGATGTGGAA CTCGCACTGG TAAATGGATT CAAGCATAAG
GGACCTGCGA TAATCAATAT TTTTACTGAT CCCAATGCCT TGGCAATGCC ACCCACCTTA
AACTTCGAGC AAGTAAAAGG CTTTGCAGCA TCGATGACAA AATTAATGGT CAATGGAAAA
TTTGCCGAAA TCGTCGATAC GACCAAGAAC GATTTAAAAT ACTTACGGGA GTTATGA
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| Protein sequence | MSKNVADHLV EMLVEAGVKR VYAVTGDSLN PVNDAVRRDG RLQWIHVRHE EAGAYAASME
AELNGIGCCM GSSGPGHVHL VNGLYDANRA ENPVIAIAST IHTEKMGLDN FQETRPEALF
QDCSKYVFLA NTPKQAVNGL QTAIQHAISK KGVAVLGLPG DVASASLESV HTANKNFYTQ
PRITPSNEQL LELASVINEH EKVMLFCGHG CRYAVEEVMA LAKRLNAPLG YSFRGKIFFE
RKENPYAVGL NGLLGNKSGF EAMHQADVLL MLGTDFPYSE FLPEKCKIIQ IDTKPEKLGR
RAKVDLGYCG DIKSTLEDLM PLIDVKTSTD FLDKTRSLHQ EIEAIYESYV EEKGSEKNIH
PEYVAHLVDK LADDDAIFTV DTGMSAVWAA RYLKAGANRY LTGSFNHGSM ANAMPMAMGA
GLSQPDRQVI AFCGDGGISM LLGDLMTISQ YQIPVKIIIF NNRSLAMVKL EMRVEGYMEW
QTDMVNPDFI KLAEAMNIAA WEATESKDVE LALVNGFKHK GPAIINIFTD PNALAMPPTL
NFEQVKGFAA SMTKLMVNGK FAEIVDTTKN DLKYLREL
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