| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2291 |
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| Symbol | |
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| ID | 7087705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2723051 |
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| End bp | 2726872 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461189 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_002358213 |
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| Protein GI | 217973462 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC AGATGCAGTT AAACGCAGCG GCGTTACATT CAGCGGCGCA GGCGCTTGAT
CCACTCACAT TGCCCTTTGG CGGTAGTCGT CTTATTGAGG CCAGCGCTGG TACAGGTAAA
ACCTACACGA TTTCAGGTCT CTATTTACGC TTATTGCTTG GCGATGGCAT AGCAGCGCCG
TTGACCTGCG AGCAGATTCT CGTGGTAACT TTCACCAATG CGGCCACCGA AGAGCTAAGG
GATCGTATTC GCCGGCGTAT TCAAGTCGCC TTCAAGTGCT TCTTAGGGCT AACGATTGCC
GATCCCTTTG TGCAGGCGCT GTATGACAAC ACCCCAGAGA GTGAACGCGC CATTGCCCTG
AGGCGATTCG ATCTCGCCCT TAAATCCCTC GACGAAGCGG CAATTTTTAC CATTCACGGT
TTCTGTCAGC GAATTTTATC GGATCTCGCC TTTGAGTCTT CCTTGCTGTT CGAATCGGAC
TTTACTTTGG ACGACAGCGA ATTTTTGCAC CATGCGGTGC GGGATTTTTG GCGTGAGGCC
TGTTATCCGC TGCCCGATTA CTTAGCGCAA ATCATTGCTA AGGAATTTGG CGAGCCCGAT
GGTTTGGTCA AACAATTGCG GCCGCTCCTT GGCGCCAGTC AAGCAAAGCC TCTGAAACCC
GCGCTTAAGT TTGATGCCTT GGCCCTATCA CTGCGCCAAA GTTTAGAGCG CTTTAAATTA
GCTTGGCCGC GGGGACGCGA TGGCTTATTG GCATTGCTAC ACGGTTTGCC GCTGAACGGC
ACCCGCTTTG GCAAGGCAAC GGATAAGTAC CCCAAACTCG CCGCCATGTT CGATGCGCTG
GATAACTGGC TCGCCTTCGG TCATGGGTTG CCGCCACTGA AAGAGTTAGA AGCCTTGTCC
TTGTCTGAGT TAAAGCTCAA CAAGGGCGGC GTGATCCCAA GTGTGAGCGA AGCACCGCTG
ATGGATCATA TGGAGCAACT TGCCACATTG ATTGCCGCCA TTAAACCGGC GTTTTTGTAT
AGTGCGAAAC TTGGTATAAG CGAGCGATTT GCCCAGCAAA AGCAGCAAAA AAACGTGCTG
ACTCCCGATG ACTTGCTCAC AACGTTAGCA AGCGCGTTAA ACGCTAATAA TGAAACCTTG
CCCAAAGCCG TAGCGACACG TTTCCCCGTC GCGCTTATCG ATGAATTCCA AGATACCGAT
CCGCTGCAAT TTGCGATCTT CTCTGGCATC TACCAAGGCC GCTACTCGTT TGAGCAGCAA
GGTGTAGATA CTACAGAGAA CAAGCTCAGC CTGTTGATGA TTGGCGATCC TAAGCAAGCC
ATTTATGCCT TTCGCGGCGC CGATATCCAT ACCTATATTG AGGCCCGTAA TCATACGCAG
GCCCACTATC ATCTGGATAC CAACTACCGC TCAAGCGCAA ACATGGTCGC TGGGGTTAAC
CATCTGTTTA GCCAGCATCA CGATCCTTTT ATCAGTCAGT CGATCCCCTT TGATAGCGTG
AAAACGCCCA GCAGTGCCAA GGGGAAAAAC CTCACTGAAA AAACAGCTAA TCCTACGGCC
CTAAGACTAA GACTCTTAAG CGAAAGCGCA GAAAACGGCC TCAACAAAAC CACCGCTAGA
CACTTGCTCG CCGAAGATGC AGCAGCGGAG ATCACCCGTT TACTGACAGA TGCGGCCAAT
GGCGAATGCC ACAGTCCAAA CGGACCTTTG ATCGCTAAAG ACATCGCTAT CTTAGTGCGG
GATCGCAACG AAGCGGCGGT GATGAAAACC GCATTGAGTA AACGTCATAT AGGCGCAGTG
TTTTTAAGTC GTGACAGTGT GTTCGATACC CTTGAAGCGC GGGAAATGGC GTTAATTTTA
CGATCTCTGG CGAATCCTAA GGATGAACGG GCATTGCGCA GCGCCCTAGC CACGGCATTA
TTGGGCTACA GCGCCGAGCA AATTCATGCC TTCAACCAAG ATGAAGAGCA CAGACAGCTG
TTATTAGAGC AGTTTTTTAA CTTGCACCAA GTGTGGCAAA AACGCGGCAT CATGCCCGCG
CTATTAAGCC TTGCCAATAG CACTAAGCTG ATTGACCGTT TACTGCACTC CGCTAGTACG
CAAACCGATG CACAGGAGCA AGATGCCACG AATGGCGAGC GCCGTTTGAC GGATTTTCGT
CACCTTGCCG AGCTATTACA GCAAAAGGCG ACCGAGCTTG ATGGTATTAG CGCCCTGCTC
AATTGGTATG AACAGCAACT GATTGATAAC ACGGGAACCG ATGAACAGCA GCTGCGCCTT
GAGAGCGAGC AGAATCTGGT GCAGATCGTT ACTATCCATA AGAGTAAGGG CCTTGAGTAT
CCCGTGTGCT TTGTGCCCTT TGTCAGCCTA GCCCGCGACA ATCGCCGTCG CCCGACGCCT
ATGCTGTACC ACAGAACCAA CGATGCAGGT GAGCAAGAAC TCGTGTGGGA TATCGAAGGC
ACGGATGAGG GTTGGGAGCG CGCCAAACAA GAAACCTTGG CCGAAGACTT GCGCTTGCTA
TATGTGGCGC TCACTCGGCC TGTGTATTTG TGTTACTTGT ATATCGCCAA TCACAGTCGT
CAGCTTAAAA ATGGCCTTAA AAGTCAGCTG CATGAAACCG CCATCGGCTA TCTGCTCGGC
ATAGGCGACT CAGAATGTGA CTTTGTCCGT ATCTGCAATG CTGCGCAGCA GCTCGCCCAA
GATGTGGAAG CCATAAGTAT TGATAAGGTG CCCGATGACA TAGACGAGCG GCCATTGCCC
TCAAGCCAAG ACATAGCGCA AATACTGAGC GCGAAAACCT TAACCCGCCA ATACAGCACG
CCGTGGCGAG TCGGCAGTTA TTCAGGCCTA GTTAAAAATA CCAGCCATGG TAAAGCCGCT
CCGGGCGCCG ATGATGAAGC ATTAGGCACG CTTGAATATA TGGCTGCGCA AACACTCTCT
ATTCCTGATG ATCCAAGTCA TGAGCTGCAG GATGGCATGC TCAATCGCTT TAACTTTGAG
CGCGGCGCTA ACGCCGGTAG TTTTATGCAC TTAGTGCTAG AAGAGATTGA TTTTACGCAG
GCAGACAGAG ACTTACCGCT GCAACTGCCT AAAGCCATGC TGAAATACGG TATCGCACCC
GAGTGGCAAA CGGTATTGCA CACTTGGTAT CTGGATGTGC TGCACGCGCC GCTTGGGCTC
ATGCCGACAA CAATGTCATC AACAACAGTG CCAACGACAA TGCCTTCAAC ATCGGCCTTC
GAGAATAATT CCAAGACGGC CAAACCTGAA CATCCAGGAC TATGCTTAGC CAAGTTATCG
CCGCAGGATA CCTTGGTCGA AATGGAGTTT TATTTACCCC TAAGTGAACT TAAGGATACT
GAGCTCAATG CGCTACTGCA GCAGTTTGGC TATGAATCAA CACTTAAGTT TGATGATCTC
AAGGGCATGC TCAAAGGCTT TATCGATTTA ACCTTTGAAT ACCAAGGAAA ATATTATATC
GCCGACTATA AGTCGAATCA TTTAGGCGAC AACATCAATG CCTATCATCA GAACGCGCTG
CAAAGTGCCA TAACCGAACA TAGGTACGAT TTGCAGTACA TCCTCTACTC ATTGGCGCTA
CACAGATACT TGAGTTTACG CCTGCCAAGT TATGACTACG ACAGCCATAT CGGCGGTTGT
TATTACTTGT TCTTACGGGG TATGTCGGCT CAGTATCCCG GCTACGGTAT TTACTACGAC
AAGCCGCCGA AAGCACTTAT TCTCGCGCTG GATTTACTTT TTAATGACAA TTTATTTCAC
AGCAGATTAG CTGGTGCAAT CAATACAGGA GTCACGGCAT GA
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| Protein sequence | MSEQMQLNAA ALHSAAQALD PLTLPFGGSR LIEASAGTGK TYTISGLYLR LLLGDGIAAP
LTCEQILVVT FTNAATEELR DRIRRRIQVA FKCFLGLTIA DPFVQALYDN TPESERAIAL
RRFDLALKSL DEAAIFTIHG FCQRILSDLA FESSLLFESD FTLDDSEFLH HAVRDFWREA
CYPLPDYLAQ IIAKEFGEPD GLVKQLRPLL GASQAKPLKP ALKFDALALS LRQSLERFKL
AWPRGRDGLL ALLHGLPLNG TRFGKATDKY PKLAAMFDAL DNWLAFGHGL PPLKELEALS
LSELKLNKGG VIPSVSEAPL MDHMEQLATL IAAIKPAFLY SAKLGISERF AQQKQQKNVL
TPDDLLTTLA SALNANNETL PKAVATRFPV ALIDEFQDTD PLQFAIFSGI YQGRYSFEQQ
GVDTTENKLS LLMIGDPKQA IYAFRGADIH TYIEARNHTQ AHYHLDTNYR SSANMVAGVN
HLFSQHHDPF ISQSIPFDSV KTPSSAKGKN LTEKTANPTA LRLRLLSESA ENGLNKTTAR
HLLAEDAAAE ITRLLTDAAN GECHSPNGPL IAKDIAILVR DRNEAAVMKT ALSKRHIGAV
FLSRDSVFDT LEAREMALIL RSLANPKDER ALRSALATAL LGYSAEQIHA FNQDEEHRQL
LLEQFFNLHQ VWQKRGIMPA LLSLANSTKL IDRLLHSAST QTDAQEQDAT NGERRLTDFR
HLAELLQQKA TELDGISALL NWYEQQLIDN TGTDEQQLRL ESEQNLVQIV TIHKSKGLEY
PVCFVPFVSL ARDNRRRPTP MLYHRTNDAG EQELVWDIEG TDEGWERAKQ ETLAEDLRLL
YVALTRPVYL CYLYIANHSR QLKNGLKSQL HETAIGYLLG IGDSECDFVR ICNAAQQLAQ
DVEAISIDKV PDDIDERPLP SSQDIAQILS AKTLTRQYST PWRVGSYSGL VKNTSHGKAA
PGADDEALGT LEYMAAQTLS IPDDPSHELQ DGMLNRFNFE RGANAGSFMH LVLEEIDFTQ
ADRDLPLQLP KAMLKYGIAP EWQTVLHTWY LDVLHAPLGL MPTTMSSTTV PTTMPSTSAF
ENNSKTAKPE HPGLCLAKLS PQDTLVEMEF YLPLSELKDT ELNALLQQFG YESTLKFDDL
KGMLKGFIDL TFEYQGKYYI ADYKSNHLGD NINAYHQNAL QSAITEHRYD LQYILYSLAL
HRYLSLRLPS YDYDSHIGGC YYLFLRGMSA QYPGYGIYYD KPPKALILAL DLLFNDNLFH
SRLAGAINTG VTA
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