Gene Sbal223_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2290 
Symbol 
ID7087704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2719230 
End bp2723054 
Gene Length3825 bp 
Protein Length1274 aa 
Translation table11 
GC content51% 
IMG OID643461188 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_002358212 
Protein GI217973461 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGT TAATCCAGTC CAATCAGATG GAAGTGCTCT GCGCCCATTT AGCCGCTTAC 
CTGACCCAAC CCCTTGCTTT TGCACGTCTA CTGAGTAACG AGCATATTCT GGTGCAGAGT
CCTGGCATGT CGACTTGGCT GCGCCTCGAA ATCGCCAAAC AAAATGGGAT TGCCGCCGCA
TTGGAATTCC CGCTGCCGTC GAGCTTTACC TGGCAGTTGT GCCATGACTT ATTACCCGAT
GTACCCAAGG ACAACGCCTT CACTAAGGCG GCGATGACGT GGAAGCTGAT GCAACTCTTG
CCGCGCATGT TGCAAGATGA CGCCTTTGGG CCATTGAGAC ACTATCTAGG TAATACGCTA
GACAACAGGT CCACCACAAA TAGCGCCGAT ACGAGTGAAC ATCTCAACAC CAGTGATATG
ACGGCTGACG ACATTAAGCT GTACCAACTC TGTGGCCGTA TCGCCGATAT CTTCGACCAA
TACTTAGTGT ATCGCCCCGA TTGGATTTTA GCGTGGGAGC AAAACGAGCA TCCCGAATCA
CTTACCAAGC CGCTGAATGA AGACCAACGC TGGCAACCCA TTTTATGGCG CGCACTCATT
GCCTTTAACC GCGATGAGCT TAATCAAAGC CATTACCATA GGGCCAACCT GCACAGCGAC
TTAATTGCCG CGCTGAATAA CCCCGACACC TCACTCGCCC AATTGCCGCA ACGCTTATTT
GTGTTTGGCA TTTCCTCAAT GGCGCCACAA ACCCTCGAAG TGCTTTACCA TCTGGCAGGA
CGTATCGATG TGATCGTGCT GGGTTTAAGC CCATGTCAGC ACTATTGGGG TGACATTGTT
GATCCCCGTA ATCGTGCCCG CATGGCGGTG CAATATGCGG GTAAACGCCA ATTAGCCGAA
CTGTGGGAAG ATAAACTCGA AGTGGGCAAT CCGCTGCTTG CCAATAACGG CAAGATGGGC
CGTGAATTAC TCGATATGCT GCTTGAGCTC CCCGCCGAAC ACTGCGACTT TGGCGACGAT
GTGTATTGTG AGCCCTGCGA CGATCCCAAC GATCCACACA GTCACGCCAG CATGCTCCAC
GGGGTGCAAT ACGATATTTT AGAGATGCAA ACCTTAGACA GAGTACTAGG GCCAGATGCC
GAGCTGTACC AAAATGTCGA GAACAGACGC CTGCTTAAGC GCGACGATCA ATCCATTCGA
GTCAAGAGTT GTCACAGCCC ACTGCGGGAA GTCGAAACCC TGCACGATCA CTTGCTTGAG
TTACTCAGCA ACCATGCCGA CCTGACACCC AAAGACATAG TGGTGATGAT GCCCGATGTC
GCCGCCTACG CCCCCTACAT AGATGCCGTC TTCTCGGCGA AGCAAGGCCT GCATTACATT
CCCTACGCAA TTGCCGACCG CGGCGCGGCG CAGGAATCAC CGCTCATCAA TAGCTTTTTG
AATTTACTTG GGATTAATCA AAGTCGTTTT GGTCTGACCG ACATTTTGAG CATACTCGAA
GTACCCGCCA TTTTACGCCG TTTCCAACTC GATGACGATG AATTGCAACT CATCCGCCGC
TGGTTAGATG AAGCGGGCGT GCGCTGGGGC CGCGATGAAC AAAGCCGCCT TAAGCAAGGT
GTGCCAGCGT TTGAGCAAAA CTCCTGGGCC TTTGGTATTA AAAGGCTGAT TTTAGGCTAC
GCCTTGAGTG ACGATGCGCC GCTGTACCAA GACCATCTGA TCGTGACTGG CATCGAAGGC
CAATCGGCGC AGGCGTTAGG TAAGTTACTC AATTTTATTG AAGTACTCGA TGAAACGGCG
CAAATACTCG CCTTACCGCA AGTGGGCGCC CTGCGTTTGG CTGAATTAAC TGAGCTACTG
GATGCTTTTT ACGACACCGA TGAAGACGAG CGCGAGCAGT TACAGGAAAT CCGCGATGCC
ATCGCCGCCC TAGAGCAAGA GTTACTATCG GCGGGCAAGC CATTAGATAC CTCACCGTTA
GCTTTTTCTT TAGATATAAG CCCGTTAGCG CCGCTAGCCC AACAGAGTAT AAGCGGACTT
AGCCTCAGTA TTGAAGTGCT ACAACAATGG TTTAATCAAC GCTTAACCGA ATCTCGGGTC
GGACAGCGTT ATCTTGCAGG TAGCGTGAAC TTTTGTACCT TGATGCCGAT GCGCTCGATC
CCCTTTAAGG TCGTGTGTTT ACTCGGCATG AACGATGGGG TTTATCCTAG GGTTCAGCAT
CCTGTCGGCT TTGATTTAAT GGCACACTTT GGTGCCCGTA AAGGCGATCG CTCCCGCCGT
CTCGATGACA GATATTTGTT TTTAGAAGCC TTATTGTCGG CGCGCGAGCA ACTGTATATC
AGCTATATCG GCCGCAGCGA ACGGGATAAC TCTGAGCGTA TCGCCTCTAT GCTCGTCTCT
GAACTGATTG AATATTGTCA GCTGTGCTAT TTGCCTGAAA CGCTATTGGC TCAATCGCAG
AAAGCTTCAA GCCCCATAGA CCCAGAGGAT GCTGAAAAAG CCCTCTATAA CGCGATTGTC
AGCCACCAGC CGCTGCAACC CTTCGATCCT AAGTTGTATC AAGCCGCAGT AAAAAGTGAT
GACGAAAATA GCTCAAACAT AGATGGCTCA AGCATAAGCC AACATAAGTC AGGCATAGGC
CAAAGTTATA GCCAGCAATG GTGTCCGCCC AATGCCGACG CTGCGGGCAC ACATGCGGGC
CGCTTTATCG GCGCGCAAAC TCGCATCATG CTCGAAGCGG ATGAGCAAGA CTCAATGCCA
GATACAGAGG CACAGCCCGC TTCTGTGCGC GAACAACAGC AAAGCAAGCA AGTGGATGTG
TCTGCCCTGA TCCGTTTCTT TCGAAATCCG GCGCAGTACT TCTTCAACCG AACGCTTAAA
GTCGATCTTA GCCTTAATAT TCAGGCCGAT GATAATGACG AGCCCTTTAG CCTAAATGCC
CTAGAGCGCT ATATGTTGCA GGCCCAGTTA CTCGACGATG CCATAGGCCA AGGTCTGACT
GAGCCCGATA TCGAGCTAAT TAAACGCCTC AAAGCCAGCG GCAGTTTGCC GATGCAGCCC
TTCGATGATT TGCTGCTACG CCAATATCAG CACGATATTA AGCCTTTGAT TGGTAGAACC
TTGTTCCTCA AGGGAGAACA AACCAGCAGT CATGCGGATA TTAAACTCGT GTTTGACTTA
CCCATTACGG CGGGTAAATC CCAGCAAGTG TTACTGCAAG GCCGTATTGA TGACATCAGC
CCTAAGGGAT TAGTGAATTA CCGTCCCGGT AGCGCCCACG GCCGCGATGT GCTGAGGTTG
TACCTTCGCC ACCTGTGTTT AATGGCAATG GGCCACACAC ATGCAAGCTA TCTACTCGAC
ATGGGGCATT TCCACGCCAT AGCGCCAATC ACTGCTGAGC GCGCCCATGC GTTACTGGCC
GATTTGCTGG TGCTGTTTTA TCAAGGTCAG CAATATCCAC TGTGTTTTAT GCCGCGCACC
TCACTGGCCT ACGTCAGCTG CGAGGGTGAG CACGATGAGC GTTTACAGCA AGCGTTACCT
GAATGGCTGG ATGAGCAGAG TCAATTGGGT GAAGGGAACG AGCCCCATTA CCAACGCTTA
TTCAGTTTTC CGCGGGATTT CTCTGAAGAT AGCTTTGGCG CATTAGCCGA GCGCATCTAT
CGCCCTATGG TGAGTTTATA TCTCAAAGAT ACGCTGGCTC AGCTTGAGGA ATTTGCGCTG
AACGATGGCA TGAGCCAAAG CCAGACTCCC GCTGTACAAG CAACTGAAAC ACAAGCGACT
GCAGCACATT TGAACCGTAA TAGCGCACAG GGAGAGCAAG CATGA
 
Protein sequence
MLKLIQSNQM EVLCAHLAAY LTQPLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA 
LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDAFG PLRHYLGNTL
DNRSTTNSAD TSEHLNTSDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPES
LTKPLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAQLPQRLF
VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE
LWEDKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN DPHSHASMLH
GVQYDILEMQ TLDRVLGPDA ELYQNVENRR LLKRDDQSIR VKSCHSPLRE VETLHDHLLE
LLSNHADLTP KDIVVMMPDV AAYAPYIDAV FSAKQGLHYI PYAIADRGAA QESPLINSFL
NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RDEQSRLKQG
VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA
QILALPQVGA LRLAELTELL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTSPL
AFSLDISPLA PLAQQSISGL SLSIEVLQQW FNQRLTESRV GQRYLAGSVN FCTLMPMRSI
PFKVVCLLGM NDGVYPRVQH PVGFDLMAHF GARKGDRSRR LDDRYLFLEA LLSAREQLYI
SYIGRSERDN SERIASMLVS ELIEYCQLCY LPETLLAQSQ KASSPIDPED AEKALYNAIV
SHQPLQPFDP KLYQAAVKSD DENSSNIDGS SISQHKSGIG QSYSQQWCPP NADAAGTHAG
RFIGAQTRIM LEADEQDSMP DTEAQPASVR EQQQSKQVDV SALIRFFRNP AQYFFNRTLK
VDLSLNIQAD DNDEPFSLNA LERYMLQAQL LDDAIGQGLT EPDIELIKRL KASGSLPMQP
FDDLLLRQYQ HDIKPLIGRT LFLKGEQTSS HADIKLVFDL PITAGKSQQV LLQGRIDDIS
PKGLVNYRPG SAHGRDVLRL YLRHLCLMAM GHTHASYLLD MGHFHAIAPI TAERAHALLA
DLLVLFYQGQ QYPLCFMPRT SLAYVSCEGE HDERLQQALP EWLDEQSQLG EGNEPHYQRL
FSFPRDFSED SFGALAERIY RPMVSLYLKD TLAQLEEFAL NDGMSQSQTP AVQATETQAT
AAHLNRNSAQ GEQA