Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2290 |
Symbol | |
ID | 7087704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2719230 |
End bp | 2723054 |
Gene Length | 3825 bp |
Protein Length | 1274 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643461188 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_002358212 |
Protein GI | 217973461 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAGT TAATCCAGTC CAATCAGATG GAAGTGCTCT GCGCCCATTT AGCCGCTTAC CTGACCCAAC CCCTTGCTTT TGCACGTCTA CTGAGTAACG AGCATATTCT GGTGCAGAGT CCTGGCATGT CGACTTGGCT GCGCCTCGAA ATCGCCAAAC AAAATGGGAT TGCCGCCGCA TTGGAATTCC CGCTGCCGTC GAGCTTTACC TGGCAGTTGT GCCATGACTT ATTACCCGAT GTACCCAAGG ACAACGCCTT CACTAAGGCG GCGATGACGT GGAAGCTGAT GCAACTCTTG CCGCGCATGT TGCAAGATGA CGCCTTTGGG CCATTGAGAC ACTATCTAGG TAATACGCTA GACAACAGGT CCACCACAAA TAGCGCCGAT ACGAGTGAAC ATCTCAACAC CAGTGATATG ACGGCTGACG ACATTAAGCT GTACCAACTC TGTGGCCGTA TCGCCGATAT CTTCGACCAA TACTTAGTGT ATCGCCCCGA TTGGATTTTA GCGTGGGAGC AAAACGAGCA TCCCGAATCA CTTACCAAGC CGCTGAATGA AGACCAACGC TGGCAACCCA TTTTATGGCG CGCACTCATT GCCTTTAACC GCGATGAGCT TAATCAAAGC CATTACCATA GGGCCAACCT GCACAGCGAC TTAATTGCCG CGCTGAATAA CCCCGACACC TCACTCGCCC AATTGCCGCA ACGCTTATTT GTGTTTGGCA TTTCCTCAAT GGCGCCACAA ACCCTCGAAG TGCTTTACCA TCTGGCAGGA CGTATCGATG TGATCGTGCT GGGTTTAAGC CCATGTCAGC ACTATTGGGG TGACATTGTT GATCCCCGTA ATCGTGCCCG CATGGCGGTG CAATATGCGG GTAAACGCCA ATTAGCCGAA CTGTGGGAAG ATAAACTCGA AGTGGGCAAT CCGCTGCTTG CCAATAACGG CAAGATGGGC CGTGAATTAC TCGATATGCT GCTTGAGCTC CCCGCCGAAC ACTGCGACTT TGGCGACGAT GTGTATTGTG AGCCCTGCGA CGATCCCAAC GATCCACACA GTCACGCCAG CATGCTCCAC GGGGTGCAAT ACGATATTTT AGAGATGCAA ACCTTAGACA GAGTACTAGG GCCAGATGCC GAGCTGTACC AAAATGTCGA GAACAGACGC CTGCTTAAGC GCGACGATCA ATCCATTCGA GTCAAGAGTT GTCACAGCCC ACTGCGGGAA GTCGAAACCC TGCACGATCA CTTGCTTGAG TTACTCAGCA ACCATGCCGA CCTGACACCC AAAGACATAG TGGTGATGAT GCCCGATGTC GCCGCCTACG CCCCCTACAT AGATGCCGTC TTCTCGGCGA AGCAAGGCCT GCATTACATT CCCTACGCAA TTGCCGACCG CGGCGCGGCG CAGGAATCAC CGCTCATCAA TAGCTTTTTG AATTTACTTG GGATTAATCA AAGTCGTTTT GGTCTGACCG ACATTTTGAG CATACTCGAA GTACCCGCCA TTTTACGCCG TTTCCAACTC GATGACGATG AATTGCAACT CATCCGCCGC TGGTTAGATG AAGCGGGCGT GCGCTGGGGC CGCGATGAAC AAAGCCGCCT TAAGCAAGGT GTGCCAGCGT TTGAGCAAAA CTCCTGGGCC TTTGGTATTA AAAGGCTGAT TTTAGGCTAC GCCTTGAGTG ACGATGCGCC GCTGTACCAA GACCATCTGA TCGTGACTGG CATCGAAGGC CAATCGGCGC AGGCGTTAGG TAAGTTACTC AATTTTATTG AAGTACTCGA TGAAACGGCG CAAATACTCG CCTTACCGCA AGTGGGCGCC CTGCGTTTGG CTGAATTAAC TGAGCTACTG GATGCTTTTT ACGACACCGA TGAAGACGAG CGCGAGCAGT TACAGGAAAT CCGCGATGCC ATCGCCGCCC TAGAGCAAGA GTTACTATCG GCGGGCAAGC CATTAGATAC CTCACCGTTA GCTTTTTCTT TAGATATAAG CCCGTTAGCG CCGCTAGCCC AACAGAGTAT AAGCGGACTT AGCCTCAGTA TTGAAGTGCT ACAACAATGG TTTAATCAAC GCTTAACCGA ATCTCGGGTC GGACAGCGTT ATCTTGCAGG TAGCGTGAAC TTTTGTACCT TGATGCCGAT GCGCTCGATC CCCTTTAAGG TCGTGTGTTT ACTCGGCATG AACGATGGGG TTTATCCTAG GGTTCAGCAT CCTGTCGGCT TTGATTTAAT GGCACACTTT GGTGCCCGTA AAGGCGATCG CTCCCGCCGT CTCGATGACA GATATTTGTT TTTAGAAGCC TTATTGTCGG CGCGCGAGCA ACTGTATATC AGCTATATCG GCCGCAGCGA ACGGGATAAC TCTGAGCGTA TCGCCTCTAT GCTCGTCTCT GAACTGATTG AATATTGTCA GCTGTGCTAT TTGCCTGAAA CGCTATTGGC TCAATCGCAG AAAGCTTCAA GCCCCATAGA CCCAGAGGAT GCTGAAAAAG CCCTCTATAA CGCGATTGTC AGCCACCAGC CGCTGCAACC CTTCGATCCT AAGTTGTATC AAGCCGCAGT AAAAAGTGAT GACGAAAATA GCTCAAACAT AGATGGCTCA AGCATAAGCC AACATAAGTC AGGCATAGGC CAAAGTTATA GCCAGCAATG GTGTCCGCCC AATGCCGACG CTGCGGGCAC ACATGCGGGC CGCTTTATCG GCGCGCAAAC TCGCATCATG CTCGAAGCGG ATGAGCAAGA CTCAATGCCA GATACAGAGG CACAGCCCGC TTCTGTGCGC GAACAACAGC AAAGCAAGCA AGTGGATGTG TCTGCCCTGA TCCGTTTCTT TCGAAATCCG GCGCAGTACT TCTTCAACCG AACGCTTAAA GTCGATCTTA GCCTTAATAT TCAGGCCGAT GATAATGACG AGCCCTTTAG CCTAAATGCC CTAGAGCGCT ATATGTTGCA GGCCCAGTTA CTCGACGATG CCATAGGCCA AGGTCTGACT GAGCCCGATA TCGAGCTAAT TAAACGCCTC AAAGCCAGCG GCAGTTTGCC GATGCAGCCC TTCGATGATT TGCTGCTACG CCAATATCAG CACGATATTA AGCCTTTGAT TGGTAGAACC TTGTTCCTCA AGGGAGAACA AACCAGCAGT CATGCGGATA TTAAACTCGT GTTTGACTTA CCCATTACGG CGGGTAAATC CCAGCAAGTG TTACTGCAAG GCCGTATTGA TGACATCAGC CCTAAGGGAT TAGTGAATTA CCGTCCCGGT AGCGCCCACG GCCGCGATGT GCTGAGGTTG TACCTTCGCC ACCTGTGTTT AATGGCAATG GGCCACACAC ATGCAAGCTA TCTACTCGAC ATGGGGCATT TCCACGCCAT AGCGCCAATC ACTGCTGAGC GCGCCCATGC GTTACTGGCC GATTTGCTGG TGCTGTTTTA TCAAGGTCAG CAATATCCAC TGTGTTTTAT GCCGCGCACC TCACTGGCCT ACGTCAGCTG CGAGGGTGAG CACGATGAGC GTTTACAGCA AGCGTTACCT GAATGGCTGG ATGAGCAGAG TCAATTGGGT GAAGGGAACG AGCCCCATTA CCAACGCTTA TTCAGTTTTC CGCGGGATTT CTCTGAAGAT AGCTTTGGCG CATTAGCCGA GCGCATCTAT CGCCCTATGG TGAGTTTATA TCTCAAAGAT ACGCTGGCTC AGCTTGAGGA ATTTGCGCTG AACGATGGCA TGAGCCAAAG CCAGACTCCC GCTGTACAAG CAACTGAAAC ACAAGCGACT GCAGCACATT TGAACCGTAA TAGCGCACAG GGAGAGCAAG CATGA
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Protein sequence | MLKLIQSNQM EVLCAHLAAY LTQPLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDAFG PLRHYLGNTL DNRSTTNSAD TSEHLNTSDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPES LTKPLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAQLPQRLF VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE LWEDKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN DPHSHASMLH GVQYDILEMQ TLDRVLGPDA ELYQNVENRR LLKRDDQSIR VKSCHSPLRE VETLHDHLLE LLSNHADLTP KDIVVMMPDV AAYAPYIDAV FSAKQGLHYI PYAIADRGAA QESPLINSFL NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RDEQSRLKQG VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA QILALPQVGA LRLAELTELL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTSPL AFSLDISPLA PLAQQSISGL SLSIEVLQQW FNQRLTESRV GQRYLAGSVN FCTLMPMRSI PFKVVCLLGM NDGVYPRVQH PVGFDLMAHF GARKGDRSRR LDDRYLFLEA LLSAREQLYI SYIGRSERDN SERIASMLVS ELIEYCQLCY LPETLLAQSQ KASSPIDPED AEKALYNAIV SHQPLQPFDP KLYQAAVKSD DENSSNIDGS SISQHKSGIG QSYSQQWCPP NADAAGTHAG RFIGAQTRIM LEADEQDSMP DTEAQPASVR EQQQSKQVDV SALIRFFRNP AQYFFNRTLK VDLSLNIQAD DNDEPFSLNA LERYMLQAQL LDDAIGQGLT EPDIELIKRL KASGSLPMQP FDDLLLRQYQ HDIKPLIGRT LFLKGEQTSS HADIKLVFDL PITAGKSQQV LLQGRIDDIS PKGLVNYRPG SAHGRDVLRL YLRHLCLMAM GHTHASYLLD MGHFHAIAPI TAERAHALLA DLLVLFYQGQ QYPLCFMPRT SLAYVSCEGE HDERLQQALP EWLDEQSQLG EGNEPHYQRL FSFPRDFSED SFGALAERIY RPMVSLYLKD TLAQLEEFAL NDGMSQSQTP AVQATETQAT AAHLNRNSAQ GEQA
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