| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2263 |
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| Symbol | |
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| ID | 7086390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2685596 |
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| End bp | 2687779 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461161 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002358185 |
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| Protein GI | 217973434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.659686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0397719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGAC GTCAGCATCA GCATTTATTG GAGTCTTTGG TTCAGTCAAC TGCAAAACAG
CAGGGCGATT TCACCAAGAC AGCAGAGTTA GCCACAGAGT TGTTGTGCCA GAATTTAGCG
GTTTCTTTGG TGTCAGTGTG GACGTTTTCA GCTGATCAAC AAACCCAAAC ACTCGTTGCA
CAATTTGGTT CTATGATGTT GCAAGACATT CATAGGCCTA AACTATTACA AGCTTGTCCC
CGTTATGTGC ACGAGCTTAA AACCCTGCGC CATATCGATG CTGGCAATAC GCTGACCGAT
CCCCGTTTAA GTGAATTGGC AGAGTGCTAC TTTATCCCGC GGCACATCAA TTCGAGTCTC
GACATCGCCA TTCGCATCAA TGGTTGTCTG GAAGGTGTGC TCTGCATCGA GCGGGCGCAA
TTCACCCCTC ACTGGCACGA CAGCGAAATC CACCTCGCGT GCCAGATGGC CGACCAATTA
GCTCTGACCT TAGCGACAAA ACATAGCTAC GACAAAGAAG AAAGACTGAG CTTGTTTCGC
TGTGCGACTG AGCAGTCTCG GCAGATCAGT ATGCTCATAA ATTTGCATAC TGAAAAAGTC
GAGTATGTGA ATCAGGCGCA CAGTGAAATC ACTGGCATGC CCCGTGAGCA GATAATCGGC
GCAAATATCC GTGAATTGGC TTTTTTTAAG CAGCATGCCC AATTAGCCGA GCAAACCCTA
GCGCAGATTT TTAGGGGCGA AATTGCCAAA GGCGAAGCGC AGTTTAGCCG TGCCGATGGT
AGTCGTTATT GGCTGACATA TGTGCTGAGT CAATTTATTA CCGATCGCGG CAATCATTAT
GCCTTGGTCT CGTGTGAGGA AAATACCGAT GAGCACAACT ACAAATCAGA GCTTGAACGC
CTCGCTTGGC GCTGTGGATT AACGGGGCTA CATAACCGTA CCCACTTTAA TCGAGTGCTT
GAACGTACCA ATAAGGGACT GTTGTTATTA GTCGATCTGG TTGGATTTAA ACGGTTTAAC
GATACCTATG GGCATGAGAA TGGCGATAGC TTATTGATTG AAATCGCCCG CCGTTTGAAA
CATTTCTCCG AGATCAATAA AGCCACCGAA ATTGCCCGTG TCGGCAGCGA TGAATTTGCC
GTGCTGCTGA CCGATGATAA CGCGGTATAC GATCTCGATT ATTTTAGTAC GCGTCTGTAT
CAGCATCTGG CTATGCCTAT CTTAATCGGT CGCGAACAAG TCGAGCCTAA GCCTGCCTTA
GCTGTGGTTG ATATCGCCTC GGTGGCGAGT TTGTTTGCTC CGTTAACCTG TGCCGATATT
GCCGTTCAGT ATGCTAAAAA GAAAAAGGGC ACAGCAATCC AAGTGTTTAA CAGCACTTTA
TTGAGCGCAT TTAAAGAAGA TGCACAGATA GAGCGCGATT TACACAGTGC CATCCGTGGC
CGTCAGTTTG AGCTTTATTA TCAGCCACTG AGGGATTTGG AGCAGAATAC CTATATTGGC
GCTGAAGCTT TAATCCGTTG GCATCACCCT AAAAGAGGCG TGTTATTTCC CGCATCTTTT
ATCGATATTG CCGAGCAATC GGGGATGATT AATTCCATCG GCAGCTGGGT GTTAGAGGCC
GCATGTCGCC AGTTGAACCT GTGGCAACAC CATAACGCGG ACATGACGAT GCACGTGAAT
GTGTCGGCCC GTCAGTTTTT CAGTGGCAAT TTATTCGAGC AGGTGTGGCA GCTATTAACT
CGTTATCGAT TGAAACCTAA GACGTTAATT TTAGAAATCA CTGAAACTGA GTTGATGGGC
GACATTCGCC ATGCGACCTT GTTATGCCAA GAATTGGCTG AATTAGGCGT AGGACTTGCG
ATTGATGATT TTGGTACGGG TTACAGCTCT ATGCGTTATT TGAAGCAGTT CCCGATCAGT
AAACTCAAAA TTGATCGGTC GTTTATTTCA GATCTCACTG TGAGTCGTGA AAGCCGCGAA
ATTGTCTCAG CCATTATCGC CATGGCGAGT GCTTTGAATA TCTCCTTGAC GGCAGAAGGG
GTTGAAACCC TTGAGCAAGA AGCCTTTTTA GCGAAAAGCT TTTGCCATCA GGCGCAGGGT
TATCTCTATA GCCCCGCATT ACGGGAGCCT GAGTTTGCGC AATTTATCTT GTCGGCCAAA
AGCCCTTCGG TCTTGACCCA CTAA
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| Protein sequence | MKRRQHQHLL ESLVQSTAKQ QGDFTKTAEL ATELLCQNLA VSLVSVWTFS ADQQTQTLVA
QFGSMMLQDI HRPKLLQACP RYVHELKTLR HIDAGNTLTD PRLSELAECY FIPRHINSSL
DIAIRINGCL EGVLCIERAQ FTPHWHDSEI HLACQMADQL ALTLATKHSY DKEERLSLFR
CATEQSRQIS MLINLHTEKV EYVNQAHSEI TGMPREQIIG ANIRELAFFK QHAQLAEQTL
AQIFRGEIAK GEAQFSRADG SRYWLTYVLS QFITDRGNHY ALVSCEENTD EHNYKSELER
LAWRCGLTGL HNRTHFNRVL ERTNKGLLLL VDLVGFKRFN DTYGHENGDS LLIEIARRLK
HFSEINKATE IARVGSDEFA VLLTDDNAVY DLDYFSTRLY QHLAMPILIG REQVEPKPAL
AVVDIASVAS LFAPLTCADI AVQYAKKKKG TAIQVFNSTL LSAFKEDAQI ERDLHSAIRG
RQFELYYQPL RDLEQNTYIG AEALIRWHHP KRGVLFPASF IDIAEQSGMI NSIGSWVLEA
ACRQLNLWQH HNADMTMHVN VSARQFFSGN LFEQVWQLLT RYRLKPKTLI LEITETELMG
DIRHATLLCQ ELAELGVGLA IDDFGTGYSS MRYLKQFPIS KLKIDRSFIS DLTVSRESRE
IVSAIIAMAS ALNISLTAEG VETLEQEAFL AKSFCHQAQG YLYSPALREP EFAQFILSAK
SPSVLTH
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