Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2258 |
Symbol | |
ID | 7086385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2680602 |
End bp | 2681240 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461156 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002358180 |
Protein GI | 217973429 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.968255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0010637 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAGTC GATCCGATAC AAAAACTAGA ATACTTGATG CCGCAGAAAA ACTGTTCGCC GAACGGGGCT TTTCTGAGAC CTCGTTGCGA CTCATCACCA GTAAGGCTGA GGTGAATTTA GCATCGGTCA ATTATCACTT TGGTTCTAAA AAAGAGCTGA TCCGTGCAGT ATTAGCGCGT TATTTAGACG TGTTTATGCC TGCGGCTTCA AACCAAATTA ATCGCTTAAA TGCCGCGCCA GCACAAGCAA CACTCGAAGA AATTTTGTCT TCGCTGGTCG ATCCTTTATT GGATTTAAAC GCGCTACGTA CCGAAGGCAC CACGATCTTC CTGCAGCTTT TAGGCCGCGG CTATATCGAA AGCCAAGGGC ATTTACGTTG GTTTATCACT ACCCATTACG GCCAGCATCT CGATGCTTTT GTTAAAGCCG TGTCGGCCAG TGCGCCACAT ATTCCACCCG CTGAAATGTT TTGGCGTTTA CACTTTACCT TAGGCACTAT CGTATTCACT ATGGCCTCCG CCGATGCCCT AAACGATATC GCTGCTGCTG AGTTTGGTGA GCATAACGAC ATCGAAGCCG TGATCCGTAA AGTGATCCCA TACATGGCGG CTGGCGTATC AGTCCCCGTT TCTTCTTAA
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Protein sequence | MASRSDTKTR ILDAAEKLFA ERGFSETSLR LITSKAEVNL ASVNYHFGSK KELIRAVLAR YLDVFMPAAS NQINRLNAAP AQATLEEILS SLVDPLLDLN ALRTEGTTIF LQLLGRGYIE SQGHLRWFIT THYGQHLDAF VKAVSASAPH IPPAEMFWRL HFTLGTIVFT MASADALNDI AAAEFGEHND IEAVIRKVIP YMAAGVSVPV SS
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