| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2217 |
|---|
| Symbol | |
|---|
| ID | 7086344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2631975 |
|---|
| End bp | 2632943 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643461115 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit III |
|---|
| Protein accession | YP_002358139 |
|---|
| Protein GI | 217973388 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000127298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.441817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCT TCTGGAGTGT TTGGATTACC GTACTCTCGT TAGTCGTGAT CGCGGGTTGT
TTTCTATTAC TGCGTGTGTG TTCTAAGAAC ACCACGGGCG TAAAAGAAGG CGAATCCATG
GGTCACAGTT TCGACGGTAT TGAAGAACTC AATAACCCAC TGCCAAAATG GTGGAGTTAT
ATGTTCTATA TCACTATCGT GTTTGGCTTG ATCTATCTAG CCTTATTTCC TGGTTTAGGT
AACTACAAAG GCCTTTTAGG CTGGACGAGT TCTAACCAGA GCATTGGTAC TGAACAAGGT
ATTAAAGCCG ATTCTGCCGC AGCCATTGAG CTTGCAGCAA AAGAAGGCCG TTATGTTCAG
TATGACCAAG AAGTAAAACA CGCTAGTGAA AAATATGGCC CAATCTTCGC GGCTTACTTG
GCAACACCAC TAGAAGAATT AGTGAAAAAC CAAGAAGCAT TGAAAGTGGG CGGCCGTTTG
TTCCTACAAA ACTGCGCACA GTGCCATGGC TCTGACGCAC GTGGTAGCAA AGGCTTCCCT
AATCTCACCG ATGGTGACTG GTTATATGGT GGCGACTTAG CCACGATTAA AACCACTATC
ATGGGTGGTC GTCATGGCAT GATGCCGCCG AAAGGTGGTT TGCCAATCGA TGACAGCGAA
ATTGCGGGTT TAGCTGAATA CGTTGTTAAA TTGTCTGGTC GTGAGCACGA TGAAACACTC
GCCGCTCAAG GTCAAGGCTC ATTCATGAAA GGTTGTTTCG CGTGTCATGG TATGGACGCT
AAAGGCAACA AGTTCATGGG TGCTCCTAAT TTAACTGACG ATGTTTGGTT ATATGGCGGT
AGCCGTGGCG TGATCGAAGA AACCATTAAA CATGGTCGCG CAGGTGTAAT GCCAGCGTGG
AAAGACGTTC TCGGTGAAGA GAAAGTTCAC GTAATCGCAG CTTATGTTTA TAGCTTGTCA
AACAAGTAA
|
|---|
| Protein sequence | MSSFWSVWIT VLSLVVIAGC FLLLRVCSKN TTGVKEGESM GHSFDGIEEL NNPLPKWWSY
MFYITIVFGL IYLALFPGLG NYKGLLGWTS SNQSIGTEQG IKADSAAAIE LAAKEGRYVQ
YDQEVKHASE KYGPIFAAYL ATPLEELVKN QEALKVGGRL FLQNCAQCHG SDARGSKGFP
NLTDGDWLYG GDLATIKTTI MGGRHGMMPP KGGLPIDDSE IAGLAEYVVK LSGREHDETL
AAQGQGSFMK GCFACHGMDA KGNKFMGAPN LTDDVWLYGG SRGVIEETIK HGRAGVMPAW
KDVLGEEKVH VIAAYVYSLS NK
|
|---|
| |