| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2206 |
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| Symbol | |
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| ID | 7086012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2621505 |
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| End bp | 2623130 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461105 |
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| Product | multi antimicrobial extrusion protein MatE |
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| Protein accession | YP_002358129 |
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| Protein GI | 217973378 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.711563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.711708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACATG CAACCGCCAA CACTTTCAAG CCCGCCAGTA TCAATGTTGA ACCTTCTGAC
ATTGTGCCCT TTGCAGCCAC CGAAACCCCC TCCCACGGGA AATCTCATTC AGGCTTTCAG
TCAAGATCTC AGTCAACAGA CTCCTTAGGT ACATTAGCTA TCCCTGCTTT GTATTTACGT
TTTGCGTTAC CCATGGCCTT CGCCATGATG CTCAGCGGCA GCTACAACTT AGTCGACTCT
TATTTTATTT TGAAATACAT CGGCGCCGAT GCATTGGCTG GGGTAACGAT TGCCTTCCCG
TTACAAATGA TGATTTTCGC TTTAGCCTGC ATGATAGGAA ATGGGACTGC GACCTTAGTG
AGCCGATTTT TAGGGGCAAA CGAGTTTGAT AAGGCGAGTC AAATCGCGAA TACCGGTTTC
GCGTTAGCCC TATGTTGCGG AGTGATCGTC ACTGTCGTGT CACTCGGCCA GCTTAATAAT
TTATTAGCAT TTATTGGGGT AAGCTCAACA CTTGCCTTAG CTGCTACAGA GTATCTACAA
CCCATTCTCT GTTTTAGTCT GTTCACCTTT TTGTTATCCC TTAGCGGCGA TTTACTCAGA
GCACAAGGCA AAGTCGTGGT GATGCTGCTG GTTATCTTGT TGTCGGCGGT CATGAACATT
CTGTTCGATA CACTCTTTAT TGCCGTTTTG GAGATGGGCG TAAGTGGTGC GGCGTGGGCT
ACGGTAGCGG GCCAATGTGT GAGTCTATTT ATCGCCGTCG TCTATTTTGT TCCAAATAAC
CGCTTTGCCA ATAAGCAGGC GCTTCATCGG CAAGCTGCCC AGCCTATTTG TTTTAGAATA
GAGCAGATAA AGCTCAACCT CACTGAGATA AAAGCGATTC TTGGCTTGGG TAGCCCAATA
CTATTGTCAT ATCTTGGGAT TGCCTGCGTG ATCTCATTGG TAAATCATAT TTTAGTCAGT
CATTTAGCCA ATGTAGTGCC CAATACGCCA GCGGCGAATG AGGTCGCGTA CATGATCAGC
GCTTATGGTT TGATCGGCCG CTTTAATATC TTTATCGCCC TGCCGCTCAT GGCTCTCACC
AGTGCAGCAC AAACGATCAG TGCCTATAAC TATGGGGCGA TGGCATCTTC TCGGGTGTTA
GCGTGTGCTA AATGGGGAAT CGTCTTGACC TGCTGTTATC TGAGTGTTGT GACAATCATA
TTTATGGGGT TTCCTACCTC GGTATATGGT GTTTTCACCG ATAATCACTC ACTCATTGCA
GCCTGTATTA AGATTTCGAG TGTGACGTTT ATCGCCTTAC CTTTGGCGGG GATCACAGGT
ATTGCGATTG CGGTGTATCA AGGCACAAAC CGCCCTAAGC TTGCATTGCT ATTATCTGGG
ATAAAAATCT ATGGTTTGTT ATTGCCCCTG CTGGTCCTGT TACCTCAACT ATCCTTTACA
GATATTTCAT TTATCACAGG TGTATTAAAC ATTAATATCA TGCCAAACGC TTTGATTGAG
TTATGGATGG CCTTTCCAAT TGCGGACATT TTAGCTTGTC TCTTGAGTTT ATTGATCATC
AGTATTTGGC CTTTCATTCA CGTGCCGCGA GCAAATGGAG TCAGTCATGG AGGTAATGCA
AAATGA
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| Protein sequence | MKHATANTFK PASINVEPSD IVPFAATETP SHGKSHSGFQ SRSQSTDSLG TLAIPALYLR
FALPMAFAMM LSGSYNLVDS YFILKYIGAD ALAGVTIAFP LQMMIFALAC MIGNGTATLV
SRFLGANEFD KASQIANTGF ALALCCGVIV TVVSLGQLNN LLAFIGVSST LALAATEYLQ
PILCFSLFTF LLSLSGDLLR AQGKVVVMLL VILLSAVMNI LFDTLFIAVL EMGVSGAAWA
TVAGQCVSLF IAVVYFVPNN RFANKQALHR QAAQPICFRI EQIKLNLTEI KAILGLGSPI
LLSYLGIACV ISLVNHILVS HLANVVPNTP AANEVAYMIS AYGLIGRFNI FIALPLMALT
SAAQTISAYN YGAMASSRVL ACAKWGIVLT CCYLSVVTII FMGFPTSVYG VFTDNHSLIA
ACIKISSVTF IALPLAGITG IAIAVYQGTN RPKLALLLSG IKIYGLLLPL LVLLPQLSFT
DISFITGVLN INIMPNALIE LWMAFPIADI LACLLSLLII SIWPFIHVPR ANGVSHGGNA
K
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