Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2203 |
Symbol | |
ID | 7086009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2615981 |
End bp | 2617252 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461102 |
Product | inner membrane transport protein YdhC |
Protein accession | YP_002358126 |
Protein GI | 217973375 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000782097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.105834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGT CTAGTAACAC CTTTGTAAAC ATAAAGTTCT TTATGTTTCT ATTCTATTTA GCCATGTTGA GCATGCTCGG CTTTATTGCC ACTGACATGT ATTTGCCTGC TTTCAAAGCA ATTGAAGGCT CGCTTAACAG TACACCGTCA CAGGTGGCGA TGTCGCTGAC CTGTTTCCTG GCGGGTCTTG CCTTAGGTCA GCTACTTTAT GGCCCCTTAG TCAATAAAAT CGGCAAACGT TGGGCACTGA TTTTTGGCCT AGTGCTATTT GCCGTTGCCA GCGTGTTTAT TGCCAACAGT GATTCTATCC TAATGCTCAA TACCGCGCGC TTCTTCCAAG CGATTGGCGC CTGTAGTGCA GGGGTTATTT GGCAAGCGAT TGTGGTTGAA CAATATGATG CTGATAAAGC CCAAGGTATT TTCAGTAACA TTATGCCACT GGTCGCATTA TCGCCTGCAT TAGCACCGAT CCTTGGCGCT TACATTCTGA ACGAATTAGG CTGGCGTGCA ATCTTTATCT CTTTGTGTGT TATCGCTTTT CTACTGATAT TGATGACCTT GTACTTTGTA CCAGGCAAGC GTCAGCATAC ACACAGTGAA TATGCTGCGG TATCTTATGG GCAAATTTTG AAAAACACCC GCTATTTAGG CAACGTCGTG ATCTTCGGCG CCTGTTCCGG TGCTTTCTTT GCTTATCTAA CCGTATGGCC GATTGTGATG GAAATGCACG GTTATCTGCC AACTGAAATC GGCCTTAGCT TTATCCCGCA AACCATCATG TTTATTGTCG GTGGTTATGC GAGTAAGTTA CTGATAAAAC GCATTGGTGG GCATCAAACG CTGAATATCT TGTTGTCGAT TTTCGCAGCC TGCGTTATTT CGATCATCAT GTTCACGCTG ATTTTCCCAG CAAGCACGAT ATTCCCACTG CTTATTTCGT TCTCGATTTT GGCCGCAGCT AATGGTGCCA TTTACCCGAT AGTCGTGAAC AGCGCGCTAC AGCAGTTTAG TCAGAATGCC GCTAAGGCCG CAGGATTACA GAACTTCTTG CAGATCAGCA TTGCCTTTGG TGCATCTAGC TTAGTCGCTA TGTGGGCGAG CCTAGGTGAA GTAGCGATCG GTTGGGGCAT CCTATGTTGC GCTATCTTAG TTGTGGTCGG CTATGTGCTG AAGAGCCAAC AAGGGTGGGG CGATTTTGCC AAACATTTCA CTAAGCCAGA TCCCGCACGT GTTGGCATAG TGGCCGATGT GAAGCAAAAT CCAGCGGATT GA
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Protein sequence | MKTSSNTFVN IKFFMFLFYL AMLSMLGFIA TDMYLPAFKA IEGSLNSTPS QVAMSLTCFL AGLALGQLLY GPLVNKIGKR WALIFGLVLF AVASVFIANS DSILMLNTAR FFQAIGACSA GVIWQAIVVE QYDADKAQGI FSNIMPLVAL SPALAPILGA YILNELGWRA IFISLCVIAF LLILMTLYFV PGKRQHTHSE YAAVSYGQIL KNTRYLGNVV IFGACSGAFF AYLTVWPIVM EMHGYLPTEI GLSFIPQTIM FIVGGYASKL LIKRIGGHQT LNILLSIFAA CVISIIMFTL IFPASTIFPL LISFSILAAA NGAIYPIVVN SALQQFSQNA AKAAGLQNFL QISIAFGASS LVAMWASLGE VAIGWGILCC AILVVVGYVL KSQQGWGDFA KHFTKPDPAR VGIVADVKQN PAD
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