Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2202 |
Symbol | |
ID | 7086008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2614963 |
End bp | 2615865 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643461101 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_002358125 |
Protein GI | 217973374 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000614587 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.242008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTCAG AACAAGCGCT AGAACTCATA GATATTGTGG CTCGTGTAGG AAGTTTCACC GCGGCGGCGA ATCGGCTGCA TAAAGTGCCC TCTGCCGTGA GCTACGCGGT CAAGCAAATA GAAGAAGAAC TCGGCGTCAT TCTTTTCGAA CGTCATCATC GCAGCGTAAC CTTAACCCCT GCGGGTGAAC ATTTTGTTAA GCAAGCCAGA ACTTTGCTTA CGCAGATGGA CGAGATGAAG CGTGGCACGC AGCGCGTAGC AAACGGTTGG CAACCGACCT TGTCTATCGC GCTGGATAAT ATCGTCCGTG CCGATAGGAT CAGTGTATTG ATTGCTGACT TCTACCGGCA TTTCCATGAT ATTGAATTGA TTATTCGCAT TGAGGTCTTT AACGGAGTTT GGGAAGCGCT CGCCACGGGC CGCAGTGACA TTGCAATTGG TGCCACAACC GCCATTCCGG TCGGCGGCGT GTACCAATAT AAAGACATGG GCGATATTGA GTGGGCATTT TTAGTCAGCA AAAATCATCC ATTAGCCAAT ATTGACCGTC CGCTAAGCGA CGATGAACTG CGCCCTTTCC CCTCGATTTG CCTAGAAGAC ACCTCTCGGG AAATTCCAAA ACGTATGACT TGGCTGCTCG AAAATCAACG TCGCCTCGTT GTACCCGATT GGATCCGCGC CATTAACTGT TTCCGCGAAG GTTTAGGCGT TGGTTATATG CCAGTGCACT TAGCAAGTGT GTTTATTAAA GCGGGTGCGC TGGTTGAGAA ACAGCTAGAA AATCCTAAGC AGACCAGCCC TTGTTGTCTC GCGTGGAATG CCGACAAAAT GTCGCCTGCG CTCGCTTGGG TGCTGGAATA TCTGGGCGAT ACTGAAAAAT TGCATAAAGA GTGGCTGGCT TAA
|
Protein sequence | MLSEQALELI DIVARVGSFT AAANRLHKVP SAVSYAVKQI EEELGVILFE RHHRSVTLTP AGEHFVKQAR TLLTQMDEMK RGTQRVANGW QPTLSIALDN IVRADRISVL IADFYRHFHD IELIIRIEVF NGVWEALATG RSDIAIGATT AIPVGGVYQY KDMGDIEWAF LVSKNHPLAN IDRPLSDDEL RPFPSICLED TSREIPKRMT WLLENQRRLV VPDWIRAINC FREGLGVGYM PVHLASVFIK AGALVEKQLE NPKQTSPCCL AWNADKMSPA LAWVLEYLGD TEKLHKEWLA
|
| |