Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2175 |
Symbol | |
ID | 7085981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2591643 |
End bp | 2592461 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643461075 |
Product | short chain dehydrogenase |
Protein accession | YP_002358099 |
Protein GI | 217973348 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.328635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00607004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGAATA AACTTGTGGC ACTTGTGACG GGCGCCTCAT CCGGCATTGG CGAGGCCACG GCCATTAAAC TTGCCGCTGC TGGCTACCGC ATTTACGGCA CGAGCCGTCG TGGGGCAACA TCAAATGACG CTCACTTTCC AATGCTGGCG CTCGACGTGA CAAATGATGA ATCTGTCGAA GCTGCCGTTA CCGAACTGCT TCGCCTTGAG GGACGCATTG ACCTTTTAGT TAATAATGCG GGTTTTGGCG TTGCCCCCGC AGGTGCAGAA GAAAGGTCAA TAGAACAAGC AAAGAGTATT ATTGACACAA ACTTCTTCGG TATTGTCCGT ATGACCCGTG CCGTCGTGCC CCATATGCGA CGTCAAGGTT CTGGCCGGAT CATTAACATC AGTTCAATTA TAGGTGTTGT GCCTATGCCT TATGTGGCGC TTTATGCCGC CAGCAAGCAT GCCGTTGAGG GCTACTCTGA GGCCTTAGAT CATGAATTGC GTACCCGCGG CATTAGGGTG TCATTAATCG AACCTGCGTT TACCAAAACC AAATTTGAAG CAAACAATGT CCAACCCGAT TCTATGCTTG CAGAATACGA CAAGATCCGC GCTAAGCTGA CTAAAGTTGT AGAAGAGGCG ATGGAAGGTG GCGACACACC TGAAGTCGTC GCGGAGGTGG TGCTAAAAGC GGCTCAGGCA ACTAAGCCTC AATTACGTTA TACCGCAGGT AAGGCTGCCA GCCAGCTTAA ATTTTTACGC AGATTTGCCC CAGCCTCAGT ATTGGATAAA GGCATACGTA AAAGCCTGCG GATTGATGAG AAAGGATAA
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Protein sequence | MTNKLVALVT GASSGIGEAT AIKLAAAGYR IYGTSRRGAT SNDAHFPMLA LDVTNDESVE AAVTELLRLE GRIDLLVNNA GFGVAPAGAE ERSIEQAKSI IDTNFFGIVR MTRAVVPHMR RQGSGRIINI SSIIGVVPMP YVALYAASKH AVEGYSEALD HELRTRGIRV SLIEPAFTKT KFEANNVQPD SMLAEYDKIR AKLTKVVEEA MEGGDTPEVV AEVVLKAAQA TKPQLRYTAG KAASQLKFLR RFAPASVLDK GIRKSLRIDE KG
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