Gene Sbal223_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2172 
Symbol 
ID7085978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2588937 
End bp2589494 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID643461072 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002358096 
Protein GI217973345 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0046251 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTGA CAAAAGCGCA GGCTCAAGAA AACCGCGAGC ATATCGTTAA GACTGCCTCA 
GTATTGTTTC GTGAGCGTGG TTATGATGGT GTTGGCATCG CTGAGTTAAT GTCTACAGCA
GGATTTACTC ATGGTGGGTT TTATAAACAT TTTAAGTCTA AAGCGGACTT AATGGCAGAA
GCTGCGGCCT ACAGTTTTAC ACAATCAAAC GCACAAATGG CTGATTTTGA CATCGTCTCT
TTTGTGCAAA AATACCTATC CCGCGAGCAT CGTGATGCCT CAGGTAACGG CTGTACCATG
GCCGCTCTAT GTGCAGATGC GGGGCGTCAA TCTGAGCAAC TCAAAGAAAC ATTTTCGAGT
GGGATTGAAA ATCAACTAGC CAGTTTGTCA AATGGAGAAG AATCTACTGC GGAAGAACGA
AAGAGTAGAA TTAACGCTAT TGCTCATGCC GTTGGTGCTC TCGTTTTATC TCGTTCTTGC
CCAGATGATT CACATCTCGC TGACGAGATT CTTGATGTGT GCCGTGAAGA AATAATTACA
AATCTTGAAG CTAAATAA
 
Protein sequence
MKVTKAQAQE NREHIVKTAS VLFRERGYDG VGIAELMSTA GFTHGGFYKH FKSKADLMAE 
AAAYSFTQSN AQMADFDIVS FVQKYLSREH RDASGNGCTM AALCADAGRQ SEQLKETFSS
GIENQLASLS NGEESTAEER KSRINAIAHA VGALVLSRSC PDDSHLADEI LDVCREEIIT
NLEAK