| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2157 |
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| Symbol | |
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| ID | 7085963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2563130 |
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| End bp | 2565013 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643461058 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_002358082 |
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| Protein GI | 217973331 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000434172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0029689 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTATT CTCTGACTAA ATTAGTCGCC GTAATGGCGC TGTCATCCTG CTTGGGGGCA
GGTATGGTTC ACGCATCGCC CATATCAACG GACGATAACC GCATCACCAG CGAAACGTTT
GCCAACCCTT TGTTTAGAAA TGGGGCAGAT CCTTGGCTTG AATACTTTAA TGGTAACTAT
TATCTGACCA CGACAACGTG GACTTCTGAA TTAGTGATGC GCAAATCGCC CACGATTGCC
GGACTTGCCG ATGCTCCCGC ACACAATATT TGGACCGGTG CAGATAAATC ACGTTGCTGT
AATTTTTGGG CATTTGAATT CCATCCAATG CAAACCGCCG ATGGTCTACG CTGGTATGTT
ATCTATACCT CAGGTGTTGC GGAAAACTTT GACGGTCAGC GCAATCATAT CCTTGAGAGT
GAAGGCAGCG ATCCCATGGG TCCATACACC TATAAAGGTA CGCCTATGCC GGATCATTGG
AATATCGACG GCAGTTATTT GGAATATAAG GGACAGTTGT ATTTCCTTTG GTCTGAGTGG
CACGGTAAAG ATCAAGTCAA TTTAATCGCT AAGATGAGTA ATCCTTGGAC AATTGAAGGC
GAGCATAAGG TGATCACTCA GCCTACTTAC GCTTGGGAAA AGTCCGGTCT AAACGTGAAT
GAAGGACCTG AAATCATTCA GCACCAAGGA CGCACGTTCC TTGTGCATTC GGCAAGCTTT
TGTAACACAG AAGATTACTC GCTTGGCGTG GTCGAACTTA CGGGCACCGA TCCTATGGAT
CCCGCTGCGT GGACGAAATA CGACAAACCT TTTTTCAGTA AAGCCAATGG GGTTTATGGC
CCTGGCCATC ACGGATTCTT TACCTCCCCC GACGGCAGCG AAGATTGGTT GGTTTACCAC
GGCAACTCTT CACCCACAGA TGGTTGCAGT GGCACACGAT CCGCCAGAGC CCAACCTTTT
AAATGGGATG ACAAAGGCCT GCCTAACTTT GGTGAGCCAA TGGCAGACAA GCAACCCTTA
CGCGTTCCAA GTGGTGAGTT TGGGCCATTG AAAGCCCAAG TTGAAGGGGT GAAATACCGT
ATTGTTAACC ATGATACCGA CCAGTGCCTC ATCACCAATG CCAAAGGCGA TGTCAGCGTT
AGCCGTTGTG ACGATAAAGC AAGTACTTGG GTGGTTGATC CCACCAATGA CGGACTTTAT
CGATTTGCTA ACGTGGCCGA AGGCACCTTT CTCACCCAAG AAAATTGCCA AGACAGTGAA
GCCTTGGGCG TGAGTGCTGC GCCTTGGGTT GCTTCCCGTT GCCAACGTTG GTCAGTGGAT
GCCAGCCATG ATGGCTGGTT CCGTTTTGCC AATGAGCGTT CTATTCAAAA TCTGCAAGCC
ACCAATTGCA CTACCCAAAA GGGCGCAGCT GTCGTTACCG GCGAAAACCG CGTCAGCGAT
TGTACTGACT GGCGGATTGA ACCGGTATCT CATTTAGCGA TTGTAAATGC CCACAGTGGA
CGAGTGGTGT CGGCGCAACA ATGCGACGTT AAAGCCAATG CCAATGTGGT TCAACATGAA
TATACCGCCA ATGCCTGCCA GCAATGGCAA GCAACATCCA CCAGTGATGG TTATTACCGC
CTGCAATCGA AGCAGCTAAC GGCGAACAAA CAAGCCCAAT GCTTAGTGAG TGTTGATGGC
AACTTGCAGC TGGGTGGTTG CGAGCAGGCG GACAGTGAAT GGCGAACTGA GTTTATGCCA
AATGGTTCAC TGCGTGTGGT ATCGCGTAAG GGCGGTTCAT CGATGAAAGT GGCAGGCGAG
TCCTATGCCA ATGGCGATAA TATCGTTGAG GATGTCTGGA AAAATACCAT TTCGCAGCAG
TTCTATTTCA GAGAGGTGAA ATAG
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| Protein sequence | MTYSLTKLVA VMALSSCLGA GMVHASPIST DDNRITSETF ANPLFRNGAD PWLEYFNGNY
YLTTTTWTSE LVMRKSPTIA GLADAPAHNI WTGADKSRCC NFWAFEFHPM QTADGLRWYV
IYTSGVAENF DGQRNHILES EGSDPMGPYT YKGTPMPDHW NIDGSYLEYK GQLYFLWSEW
HGKDQVNLIA KMSNPWTIEG EHKVITQPTY AWEKSGLNVN EGPEIIQHQG RTFLVHSASF
CNTEDYSLGV VELTGTDPMD PAAWTKYDKP FFSKANGVYG PGHHGFFTSP DGSEDWLVYH
GNSSPTDGCS GTRSARAQPF KWDDKGLPNF GEPMADKQPL RVPSGEFGPL KAQVEGVKYR
IVNHDTDQCL ITNAKGDVSV SRCDDKASTW VVDPTNDGLY RFANVAEGTF LTQENCQDSE
ALGVSAAPWV ASRCQRWSVD ASHDGWFRFA NERSIQNLQA TNCTTQKGAA VVTGENRVSD
CTDWRIEPVS HLAIVNAHSG RVVSAQQCDV KANANVVQHE YTANACQQWQ ATSTSDGYYR
LQSKQLTANK QAQCLVSVDG NLQLGGCEQA DSEWRTEFMP NGSLRVVSRK GGSSMKVAGE
SYANGDNIVE DVWKNTISQQ FYFREVK
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