| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2147 |
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| Symbol | |
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| ID | 7085953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2550682 |
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| End bp | 2551623 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461049 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_002358073 |
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| Protein GI | 217973322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0159332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.228113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TGAAATTAGT TTCGGCATTC AGTTTATGGG CCGTTAGTGC CAGTTGCGCA
TTTGCGACGA CTGTCGGATT TTCACAGGTG GGTTCAGAAA GCGGTTGGCG AACTAGCTTC
AGTGAAGCGG TTAAAACCGA AGCCAAGCAA AGGGGCATTG ACTTGAAATT TGCCGATGCA
CAGCAAAAAC AAGAGAACCA AATCAAAGCA GTACGTAGCT TTATCGCCCA AGGTGTCGAT
GCCATTATTA TCGCACCTGT GGTTGAAACG GGTTGGAAAC CGGTACTGAA AGAAGCTAAA
CGTGCCCACA TTCCTGTTGT TATCGTTGAC CGTAATATTA AGGTTGATGA CGATTCATTA
TTCCTGACCC GCATTGCCTC TGATTTTACC GAAGAAGGCA GCAAAATCGC CCAGTGGTTA
ATGGATAAAA CCCAAGGCAA ATGTGATATC GCCGAACTAC AGGGCACAGT TGGTGCCACT
GCCGCCATCG ATCGCGCCGC CGGTTTTAAT GCCGTTATCG CTAATTACCC CAATGCCAAG
ATTGTCCGCA GCCAAACGGG TGAATTTACC CGCGCTAAGG GTAAAGAAGT GATGGAAGGT
TTCCTTAAAG CACAAAACGG CCAAGCCTTG TGCGCAGTAT GGGCACATAA CGACGAAATG
GCACTCGGTG CCGTGCAAGC CATTAAAGAA GCAGGGCTAA AACCAGGTAC TGATATCTTA
ATCGTCTCAG TTGATGGCGT ACCGGATTAC TTTAAAGTCA TGGCCGATGG TGATGCCAAC
GCAACAGTTG AATTGAGTCC TTATTTAGGC AGTCCAGCCT TTGATGCCAT CGATGCATTC
CTTAAGGGAA ACAAAGAACA ACCTAAATTG ATTAGCACTA CGGGTGACGT TTACACCCAA
GAAACCGCCG CCGCTGAATA TGAAAAACGT CGTCTGCGCT AA
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| Protein sequence | MKNLKLVSAF SLWAVSASCA FATTVGFSQV GSESGWRTSF SEAVKTEAKQ RGIDLKFADA
QQKQENQIKA VRSFIAQGVD AIIIAPVVET GWKPVLKEAK RAHIPVVIVD RNIKVDDDSL
FLTRIASDFT EEGSKIAQWL MDKTQGKCDI AELQGTVGAT AAIDRAAGFN AVIANYPNAK
IVRSQTGEFT RAKGKEVMEG FLKAQNGQAL CAVWAHNDEM ALGAVQAIKE AGLKPGTDIL
IVSVDGVPDY FKVMADGDAN ATVELSPYLG SPAFDAIDAF LKGNKEQPKL ISTTGDVYTQ
ETAAAEYEKR RLR
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