Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2143 |
Symbol | |
ID | 7085949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2545706 |
End bp | 2546641 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643461045 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_002358069 |
Protein GI | 217973318 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.209046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGG CACTTTTGAG TATTTGTTTA GTATTTAATT CGGCGGCATT TGCCGCTAAT CCTGTGTTCC CCGAAGTGTT TACTGCCGAT CCTGCCGCTA TGGTCCATCA GGATACTGTG TACCTTTATA CTGGGCATGA TGTGGCCAAA GACAACAAAA CCTTCTTTGA GATGCACGAT TGGTTAGTCT TTAGTTCAAA GGACATGCTG AATTGGACCG AACACGGCAG TAAGTTAGCG GTTAAGGATT TTAGTTGGGC AAAAGGCGAT GCTTGGGCAA GCCATGTAAT TGAAAAAGAG GGTAAGTTTT ATTGGTATGT TACAGCAAGA CACGCCAAGA TTAATGGCTT TGCGATTGGT GTGGCCGTTG CAGACAGTCC ATTAGGCCCT TTTAAGGATG CGCGTGGGAC GGCACTGATC ACCAATGATA TGACAACCGA TACCGACATC GACTGGGATG ATATCGACCC AGCGGTATTT ATCGATGATG ATCAGCAGGC CTATATTTTT TGGGGTAACT CAAAGCCTCG TTATGCCAAA CTAAAGCCCA ATATGATCGA ACTCGATGGC CCTATTCACG CTATCGATGT GCCTAATTTC ACCGAAGCGT TATGGGTGCA TAAAAAGGAT AAAACCTATT ACCTTTCTTA TGCCTCAGGT TTCCCCGAAA AAATCGCCTA CGCGACCAGC GATAATGTAA AAGGCCCGTG GAAGTACCAA GGCATACTGA ATGAAGTGGC AGGTAACTCA CCAACAAATC ATCAAGCAAT TATTGAATTA AAAGGCAAAT CTTATTTTAT TTATCATACT GGCGCCTCGC AAAATGGCGG CGGTGAGTTT AGACGAACCG TTGCCATCGA CCCGCTTTAT TACAATGAAG ATGGCACGAT TAAACGAATT CAGATGACGA CGGAAGGCAT TACTTCGGCG CAGTAA
|
Protein sequence | MKKALLSICL VFNSAAFAAN PVFPEVFTAD PAAMVHQDTV YLYTGHDVAK DNKTFFEMHD WLVFSSKDML NWTEHGSKLA VKDFSWAKGD AWASHVIEKE GKFYWYVTAR HAKINGFAIG VAVADSPLGP FKDARGTALI TNDMTTDTDI DWDDIDPAVF IDDDQQAYIF WGNSKPRYAK LKPNMIELDG PIHAIDVPNF TEALWVHKKD KTYYLSYASG FPEKIAYATS DNVKGPWKYQ GILNEVAGNS PTNHQAIIEL KGKSYFIYHT GASQNGGGEF RRTVAIDPLY YNEDGTIKRI QMTTEGITSA Q
|
| |