Gene Sbal223_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2143 
Symbol 
ID7085949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2545706 
End bp2546641 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content44% 
IMG OID643461045 
Productglycoside hydrolase family 43 
Protein accessionYP_002358069 
Protein GI217973318 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CACTTTTGAG TATTTGTTTA GTATTTAATT CGGCGGCATT TGCCGCTAAT 
CCTGTGTTCC CCGAAGTGTT TACTGCCGAT CCTGCCGCTA TGGTCCATCA GGATACTGTG
TACCTTTATA CTGGGCATGA TGTGGCCAAA GACAACAAAA CCTTCTTTGA GATGCACGAT
TGGTTAGTCT TTAGTTCAAA GGACATGCTG AATTGGACCG AACACGGCAG TAAGTTAGCG
GTTAAGGATT TTAGTTGGGC AAAAGGCGAT GCTTGGGCAA GCCATGTAAT TGAAAAAGAG
GGTAAGTTTT ATTGGTATGT TACAGCAAGA CACGCCAAGA TTAATGGCTT TGCGATTGGT
GTGGCCGTTG CAGACAGTCC ATTAGGCCCT TTTAAGGATG CGCGTGGGAC GGCACTGATC
ACCAATGATA TGACAACCGA TACCGACATC GACTGGGATG ATATCGACCC AGCGGTATTT
ATCGATGATG ATCAGCAGGC CTATATTTTT TGGGGTAACT CAAAGCCTCG TTATGCCAAA
CTAAAGCCCA ATATGATCGA ACTCGATGGC CCTATTCACG CTATCGATGT GCCTAATTTC
ACCGAAGCGT TATGGGTGCA TAAAAAGGAT AAAACCTATT ACCTTTCTTA TGCCTCAGGT
TTCCCCGAAA AAATCGCCTA CGCGACCAGC GATAATGTAA AAGGCCCGTG GAAGTACCAA
GGCATACTGA ATGAAGTGGC AGGTAACTCA CCAACAAATC ATCAAGCAAT TATTGAATTA
AAAGGCAAAT CTTATTTTAT TTATCATACT GGCGCCTCGC AAAATGGCGG CGGTGAGTTT
AGACGAACCG TTGCCATCGA CCCGCTTTAT TACAATGAAG ATGGCACGAT TAAACGAATT
CAGATGACGA CGGAAGGCAT TACTTCGGCG CAGTAA
 
Protein sequence
MKKALLSICL VFNSAAFAAN PVFPEVFTAD PAAMVHQDTV YLYTGHDVAK DNKTFFEMHD 
WLVFSSKDML NWTEHGSKLA VKDFSWAKGD AWASHVIEKE GKFYWYVTAR HAKINGFAIG
VAVADSPLGP FKDARGTALI TNDMTTDTDI DWDDIDPAVF IDDDQQAYIF WGNSKPRYAK
LKPNMIELDG PIHAIDVPNF TEALWVHKKD KTYYLSYASG FPEKIAYATS DNVKGPWKYQ
GILNEVAGNS PTNHQAIIEL KGKSYFIYHT GASQNGGGEF RRTVAIDPLY YNEDGTIKRI
QMTTEGITSA Q