Gene Sbal223_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2141 
Symbol 
ID7085947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2544007 
End bp2544609 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID643461043 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002358067 
Protein GI217973316 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.189137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAG ATTTTGATGG CATTATTTTC GATATGGACG GCACCTTGGT CGATAGCGGC 
CAGTTACATG AACAGGCATG GCGACAAACA TTAACCCACT TTGGGATCCC TATTGATGGC
GCATTAATGC GATCCTTGGC GGGCGTGCCG ACAATTGGCA CCCTTGAAAT CTTAATTGCC
CATTTTGGTG TAACACCGAC CGCCACATGT GAAGCAATGA ATGACTATAA AGAAGCCTTG
GTTCGAGAAA CCATGCACCT CTATGTTAAG CCAACCCGTT TAGCCGAATT TGCCAAGCAG
AATAAGGGCA AGCGCCCGAT GGCAGTGGGT ACAGGGGCTT ATACAGAGGA AGCGGTTGAG
ATTTTAACCC TGTGCAGCTT ACTCGAGCTA GTCGACCATG TGGTTGGTGC CGATCAAGTC
GTCGCGCCCA AACCTGCACC AGATACGTTT TTGCGCTGCG CCGAGTTGAT GGGGATTACC
CCTGAGCGTT GTATCGTGTT TGAAGATGCA AAAGCAGGTA TTCAAGCAGC ACAATCAGCG
GGCATGTTTG TGGTCGATGT CTTGATCGAT TTTGATATTA AAAACGATTA TTTCCTAACG
TAG
 
Protein sequence
MYADFDGIIF DMDGTLVDSG QLHEQAWRQT LTHFGIPIDG ALMRSLAGVP TIGTLEILIA 
HFGVTPTATC EAMNDYKEAL VRETMHLYVK PTRLAEFAKQ NKGKRPMAVG TGAYTEEAVE
ILTLCSLLEL VDHVVGADQV VAPKPAPDTF LRCAELMGIT PERCIVFEDA KAGIQAAQSA
GMFVVDVLID FDIKNDYFLT