| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2134 |
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| Symbol | |
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| ID | 7085940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2535804 |
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| End bp | 2537027 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643461037 |
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| Product | integrase family protein |
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| Protein accession | YP_002358061 |
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| Protein GI | 217973310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.565858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.985536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATA TTCGTGCACG AAATGGTAAA TTGTTATTTG ATTTTACCTA TCAGGGCGTT
AGGTGTCGCG AACAGACCAC ATTGCTCGAT AACCGGCTGA ACCGTTCTCG TCTAATGGGA
ATGCTTAACA CAATAGAAGC CGAGATAAGA TTAAATAGAT TTGTATTTAG GAATTATTTT
CCATCAAGTC CACGATGCTC ACATTTTGTC GATTCTGATG TGCTTATCGA GAACAATCTA
GTCGAAGTAC AAAAATACAA TGGGGCAACA TTACTCAGCA ATATCCCCAC ATTCAGTTTA
TTTACCGCTG AATGGCTGGC TGAGAACCGG ATACAGTGGA AAATCAGTCA CTACAAGAAT
GTCGCTATGA TATTTGAGCG TTACTTGATG CCTGAATTCG GTCATTTTCG TTTAGACGAA
ATCACCCGCC CACAGTTGAT TAAATATCGG GCTAGTATCA GTGAACCGAA ACGGAAAGGA
AGGCAAGGTA AACTCAGTAA TGACTGGATT AATCATGTTA TGACTCCGTT GCGAGGGATC
TTAAACGAAG CGGCTCTTCG TTTTGAGTTC CCAACGCCAT TTACCAATAT TAAGCCGTTA
AAAATTGATA AAACGCCTAT AGAGCCTTTC TCATTGGCAG AGGTACAGCT GTTTTTATCT
AACGTTAGAG AAGATTTTCG TGACTACTAT ACGGTGCGTT TTTTTACCGC GATGAGAACT
GCTGAGATCG ATGGTCTTAA ATGGCAATAC GTCAATTTAG AGCGTGGTGA GATATTAGTT
CAAGAGACTC TGGTTGATGG CAATGTCGAA ACACCCAAGA CATCGGCATC TTATCGCAGT
ATTCAATTGT CTCAACCTGT AACTGAGGCG CTTAAGCGTC AATTCAGCCT GACAGGGAGA
TTGACGTACG TTTTTTGTAA CTCTAAAGGT AAGCCACTCG ATCATCGAAA TGTCACCAAG
CGGATCTGGT ATCCGGCGTT AACCGCTTTG AGCCTCAAAC GTCGTCGCCC TTATCAGACG
AGACATACCT GCGCAACCTT ATGGTTAGCC GCTGGCGAGA GCCCTGAATG GATTGCCAAA
CAAATGGGGC ATAGCACGAC CAAAATGTTG TTCGAGGTGT ATAGCCGTTA TGTACCCAAT
ATCACAAGAC AGGACGGCAG TGCTTTCGAC CGCTTAGTAA AACAAATTCA GCTAGCTACA
TCAGGAGATC CCCATTATGA ATAA
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| Protein sequence | MANIRARNGK LLFDFTYQGV RCREQTTLLD NRLNRSRLMG MLNTIEAEIR LNRFVFRNYF
PSSPRCSHFV DSDVLIENNL VEVQKYNGAT LLSNIPTFSL FTAEWLAENR IQWKISHYKN
VAMIFERYLM PEFGHFRLDE ITRPQLIKYR ASISEPKRKG RQGKLSNDWI NHVMTPLRGI
LNEAALRFEF PTPFTNIKPL KIDKTPIEPF SLAEVQLFLS NVREDFRDYY TVRFFTAMRT
AEIDGLKWQY VNLERGEILV QETLVDGNVE TPKTSASYRS IQLSQPVTEA LKRQFSLTGR
LTYVFCNSKG KPLDHRNVTK RIWYPALTAL SLKRRRPYQT RHTCATLWLA AGESPEWIAK
QMGHSTTKML FEVYSRYVPN ITRQDGSAFD RLVKQIQLAT SGDPHYE
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