Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2117 |
Symbol | |
ID | 7088410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2513459 |
End bp | 2515378 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643461020 |
Product | histidine kinase |
Protein accession | YP_002358044 |
Protein GI | 217973293 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.201889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.773102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTA AATACAGTGC TTGCATCAAT ATGTTCAGTG GCTTATGGGT CACAATATTA GTGCTGTGGC TAACCTTGTC CCACTCGCTG TATGAGTTTG ACGCTATTTA CGATAAAAAA GCGCAGGCGG TTTTTACTTC CTCGCGGGAT ATGTTCCTAC AACATAAGAT CATGTTGGAT GCGCTTAAAT CTTTTTTTCA CGCGTCGAGT AAGGTGACGT CACAGGAGTT TGAGATTTTT GCCAAGGATT TACTTAAAAT CAAATCTGCC GTCGCTTTTA CGCTGACCCC CAGTCTTGAA CTGGCCTATA TCTCAGATAA AACGATGGCT ACTGAGCTTA AACAGATTGA GCTAGTCAAG GATCCTAAAG GGGAGCTTAA GGCGAGCCTT GCCAATTACA CTTTGGCTGT GGTGGCCATT GATGAGCCAA ATATGCCTTA TCTCGTTTAT GCCGTTTCTC ATCAGCGGAT ACTCGCGCGA ATCGAACAAG AGCAGGGCGT TTGCATTACC TATCAATTTG AACAGTCATT TGAGCAGTCG TTACTGCAAA ACTCATCCTG TAATCTTAAG TTAGCCAGCG GCCTATTTTC ATTATTTAAT TACTCTGATA GCCAAACCTT AGCGATCCCT GAATATCAAA CCCGAGTGAG TTTACAGGTA CAATATCAAG TGCCGCAAAA AGAAGTTATC GAGCTTATCG TGATCATCCT ACTGATTGCA GCCCTTGGCA TAGTGTTGTC CTTCCTTTTG TACTTTAAGT CTAAAAATCA GCAGATTGTG GAGCAAATTA AGCTCGATAA TCGCGCTAAA ATAGCCGTAC TTTCGAGCAT TAATCATGAA ATCCGCACCC CAATCAATGC CATTCTTGGC TATAGTCGCA TGCTAAAAAA AGCCCTCTCA CAACCACAGG AACTGGATAA AATCGTCGAT AAAATGGCTT GGTCTGCCAA CTTACTCTAT TCGGTTGCCG AAAATACCTT AAATTACAGC AAGGCAGAAG CAGGGCAGTT GAAACTGAAT TTACATTCGG TGAACTTACA CGAGTATGTG GGCAATATTC AGGACTATTA TCGTGCGTTT AGTGCAACCT CCGGCAAACG TTTACACATT GTAGTAAATG AGTCTTTGCC GCAGTTTATT GAACTCGATG GGACTAAGTT ATTCCAACTC ATGACCAACA TTATCAATAA TGCGTTCAAA TACAGTACGG GTAGCGAAGT GCATTGCTAT ATGGATTTAC ACCTTAAAGC GAATGCTAAA GATCATCGTC CTATGCTTAG GGTGCTGATC CGCGATTTTG GCGATGGTAT GTCGAAGGAG GCGCAGCGCG CTTTAGTCGA TCCCTTTATG CACGCCGCTA ACTCAACTAT TGCCGCGACA TCGGGTATGG GACTCGGACT CTATACGTGT AATCGATTGC TTGAGCAGAT TGGAGGTCGG TTTAGGCTGC GCAGTCAAAA GGGCAAAGGC ACCACAGTGT TACTGCATTT CCCCTGTCAG CTCAGCGCAG CGAAAGAACG ATTAACACTT CAATATGATC AACAAAAAGT GCTGATCATA GATGACAATC TGTTTAATCT TGAAATTTGT CGCGCCATGC TGGAGCACTA TCATTTTCAA GCCTTCAGTA CTGATAATAC AGAGCAAGCC CTGAAGATGT TGGTTAACCA TTTGCCACAG ATTGTCATTG TGGATTACCG TTTACAAGAA ATGAACGGTT TACAACTGGT AAGGCAGATG CAGCAAGTAT TACAAAACTT GGTGAGTGAT AGCCCTATTG AACATCACTG TCGTTTCTTT TTGCTCTCCG CGAATGACTG CGATGATATT CCCGAGTTAG CGTCGTTTCC TGAGGTGCAT TTCATGCAGA AACCATTTAG TGCCGAAGTC TTTCTCAGCA AATTAGCGGT AAAAGAGTAA
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Protein sequence | MSVKYSACIN MFSGLWVTIL VLWLTLSHSL YEFDAIYDKK AQAVFTSSRD MFLQHKIMLD ALKSFFHASS KVTSQEFEIF AKDLLKIKSA VAFTLTPSLE LAYISDKTMA TELKQIELVK DPKGELKASL ANYTLAVVAI DEPNMPYLVY AVSHQRILAR IEQEQGVCIT YQFEQSFEQS LLQNSSCNLK LASGLFSLFN YSDSQTLAIP EYQTRVSLQV QYQVPQKEVI ELIVIILLIA ALGIVLSFLL YFKSKNQQIV EQIKLDNRAK IAVLSSINHE IRTPINAILG YSRMLKKALS QPQELDKIVD KMAWSANLLY SVAENTLNYS KAEAGQLKLN LHSVNLHEYV GNIQDYYRAF SATSGKRLHI VVNESLPQFI ELDGTKLFQL MTNIINNAFK YSTGSEVHCY MDLHLKANAK DHRPMLRVLI RDFGDGMSKE AQRALVDPFM HAANSTIAAT SGMGLGLYTC NRLLEQIGGR FRLRSQKGKG TTVLLHFPCQ LSAAKERLTL QYDQQKVLII DDNLFNLEIC RAMLEHYHFQ AFSTDNTEQA LKMLVNHLPQ IVIVDYRLQE MNGLQLVRQM QQVLQNLVSD SPIEHHCRFF LLSANDCDDI PELASFPEVH FMQKPFSAEV FLSKLAVKE
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