| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2079 |
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| Symbol | ampC |
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| ID | 7088372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2461420 |
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| End bp | 2462604 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643460982 |
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| Product | beta-lactamase |
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| Protein accession | YP_002358006 |
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| Protein GI | 217973255 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.221207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000730378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACGAC ATACCCTGCT CGCTACCATG CCGTTATTAA GCGGTGTACT GCTCACTGCA
ACGCTTTTTT CTAATGTCAC TACGGCCCAA ACGCTTAATT CCAAAGACAT CCAGTCACTT
GTTGATTCCG CAGTCAAACC ACTGATGGCC GAGTACGGTA TTCCCGGTGC GGTGATTGGC
ATCACCATTG AGGGTAAACA GTATTTTTAC CAATATGGGG TCAGTTCTAA AACCACAGGG
CAAAGTGTGA CAGAACATAC CCTGTTCGAG ATTGGTTCTA TCAGTAAAAC CTTTACCGCG
ACACTGGCTA ACTATGCACA GGGCGAAGGT AAATTAACAC TCACGGATAT GGCCAGTGAT
TATGTTCCAG CATTAAAAGG CAGCCATTTT GATAAGATTA GTCTCATCAA TTTAGCCACC
CACACAGCGG GTGATTTGCC GATGCAAGTT CCTGATAAGG TCACTAATAA CGCAGAGTTA
ATGGATTACC TTAAGCATTG GCAACCGTCA TTTGCCCCAG GGACTCACAG GAATTACGCG
AACCCAACCA TTGGCCTGCT CGGCATGATT GCCGCACAGA GTTTAAATAA AACGTTTCAA
CAAGCACTTG AGCAAATGCT ATTTCCACAA TTGGGTATGA CAAGCAGCTA CATTAACGTT
CCGAGCAGTA AAATGGCCGA TTATGCCCAA GGCTACGATA AGCAAGACAT GCCAGTGCGG
GTCAATCCAG GCGTATTAGC CGATGAAGCC TATGGCGTTA AAACCACAGC CACGGATCTG
CTGCATTTTG TAGAGGCCAA TATGCAAATG CACCCGCTAG CTAAGCCACT GCAAACGGCA
CTCGATGAGA CCCACACGGG ATACTTTGAT GTGGGCATGA TGACCCAAGA TATGATTTGG
GAACATTACT CCTATCCTAT TGATCTTGAT AAAATACTTA TGGGTCATAC TCAGGAAGTG
GTGTTTGGCA GTACGCCAGT TAAACCTATA GTGCCGCCCC TCGCGCCGCA GCAAAATGTG
TGGATTAATA AAACCGGCTC AACCGGCGGT TTTGCCGCTT ATGCAGCATT TATTCCTGCG
CAAAAGCTTG GCATAGTATT GTTAAGCAAT AAAAACTATC CCGTTCCGCC ACGGGTGACA
GTGGGGTATC AGATTTTAAC GGGCATAGAA AAACTACAAA AATAG
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| Protein sequence | MQRHTLLATM PLLSGVLLTA TLFSNVTTAQ TLNSKDIQSL VDSAVKPLMA EYGIPGAVIG
ITIEGKQYFY QYGVSSKTTG QSVTEHTLFE IGSISKTFTA TLANYAQGEG KLTLTDMASD
YVPALKGSHF DKISLINLAT HTAGDLPMQV PDKVTNNAEL MDYLKHWQPS FAPGTHRNYA
NPTIGLLGMI AAQSLNKTFQ QALEQMLFPQ LGMTSSYINV PSSKMADYAQ GYDKQDMPVR
VNPGVLADEA YGVKTTATDL LHFVEANMQM HPLAKPLQTA LDETHTGYFD VGMMTQDMIW
EHYSYPIDLD KILMGHTQEV VFGSTPVKPI VPPLAPQQNV WINKTGSTGG FAAYAAFIPA
QKLGIVLLSN KNYPVPPRVT VGYQILTGIE KLQK
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