Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2074 |
Symbol | |
ID | 7088367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2455681 |
End bp | 2457189 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643460977 |
Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
Protein accession | YP_002358001 |
Protein GI | 217973250 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000569177 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000854993 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAACGT TACTGAAAAC CACTCTGTAT GCCAGCCTAC TCCTAGCGAC GAGCCACAAT ATCGCCCGCG CTGAGCAAAT CGACGCTGGA GCGATAGAGA CCCAAACCAC TTCGCTCAGC CAAGCGGTCA GCAAAATCAG CCCTCGGCAC TCGCAAATTG CACTGCTGGC GATGGACATG TCGAGCAATC AAGTGATCTT TAGCCAACAG GCCGAGACGC TGTTTATTCC CGCCAGCACG CAAAAGCTAC TCACCGCTGT GAGCGCCATG GCTCAGCTTG GGCCTGATTT TCGTTATGTC ACTGAATTAT GGACGGACGC ACCAATACGC AAGGGCCATA TCGCCGGCAG CGCTTATTTA CGTTTTAGTG GCGATCCGAC GTTCACTCAA GCCGATCTCA AGGCCATTTT TGCCAGTCTC GTGAAACAAG GCATTAATCG CATTGATGGA CATCTGTATT TGCTCGGCGA TAAACAAGAG CAAATGCAAG CCCCTGGTTG GGTTTGGGAT GACTTAGGCA TTTGTTTTGC CGCGCCTGTG TCGAGTTACA TTATCAATCA GAACTGCGTC TATGGTCAGT TCAACCCCAG CACGGCCAAT AAACCATCGC AGGTGAGCCT GCGCACGGGG AGTTATGGGG TAAAAGTCAG CAGCGATGCG GTATTTGATC CCAAGGCGAG TCGTGAATTT TGCCAGCTCG ATTTGGTGCG ACTAGGCCAA AACAACTATC ATCTGCGTGG TTGTTATCCG GGCGGTGAAG CGATTGGACT GGCAATTGCA GTCAGCGATC CGTTCAAATT TGCCCAAGAT AACCTCATCT CGCTGCTCAA AGGCGAGATG TCACTGGCGG GTAAAGTTAA GCTCGGCACT AGCTTGCCCA AAAAGGCGAA ACTGATTGCC AGCCATAGCT CGGCGCCTCT GCCTGAATTG CTCGATACTA TGCTGCTCAA GTCGGATAAT TTGATTGCTG ATAGCCTGTT TAAACAGCTT GGCAAAAGTT ATTTCAATGC CCAAGGTAGC TTTACTAATG GCGCGGCAGC CATGCAGCGG ATTTTAACGG AGTTAGGCGT CGATCTGAGT AACGCTAACA TTGTCGATGG TTCAGGGCTG TCACGCTATA ACTTGCTCAA TGCCCAGCAG TTAGCGGCGG TATTGGCACT CATCCATAAG GACAGCCGCT TTAGCCCGTT AATAACCAGT CTGCCGCAAG CAGGAATAAG CGGCACCTTA AGGTATCGCA TGGGTTACAA CAAGCCGCCG CTGAAACAGC AAATTTTTGC TAAAACAGGC TCGATGCAAG GCGTGTCTAA CTTAGCGGGG TTTATCCGTT TGCCTGAGCA CAGTGACACC CTGTTTGTGG TGCTTGAGAA TGGCATGAGT CCCGAGCTTA AACATCAGCA TAAACCATCG TTTAATGCCG AGTTTCTCAA GCAATTGATT TCAGTGCTGC AAGTGCCATC CCCCACCACA GCAGCGCTTA GTACCGCAGC TCACTCGGTC CAAGATTAA
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Protein sequence | METLLKTTLY ASLLLATSHN IARAEQIDAG AIETQTTSLS QAVSKISPRH SQIALLAMDM SSNQVIFSQQ AETLFIPAST QKLLTAVSAM AQLGPDFRYV TELWTDAPIR KGHIAGSAYL RFSGDPTFTQ ADLKAIFASL VKQGINRIDG HLYLLGDKQE QMQAPGWVWD DLGICFAAPV SSYIINQNCV YGQFNPSTAN KPSQVSLRTG SYGVKVSSDA VFDPKASREF CQLDLVRLGQ NNYHLRGCYP GGEAIGLAIA VSDPFKFAQD NLISLLKGEM SLAGKVKLGT SLPKKAKLIA SHSSAPLPEL LDTMLLKSDN LIADSLFKQL GKSYFNAQGS FTNGAAAMQR ILTELGVDLS NANIVDGSGL SRYNLLNAQQ LAAVLALIHK DSRFSPLITS LPQAGISGTL RYRMGYNKPP LKQQIFAKTG SMQGVSNLAG FIRLPEHSDT LFVVLENGMS PELKHQHKPS FNAEFLKQLI SVLQVPSPTT AALSTAAHSV QD
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