Gene Sbal223_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2074 
Symbol 
ID7088367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2455681 
End bp2457189 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content51% 
IMG OID643460977 
ProductD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 
Protein accessionYP_002358001 
Protein GI217973250 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000569177 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000854993 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACGT TACTGAAAAC CACTCTGTAT GCCAGCCTAC TCCTAGCGAC GAGCCACAAT 
ATCGCCCGCG CTGAGCAAAT CGACGCTGGA GCGATAGAGA CCCAAACCAC TTCGCTCAGC
CAAGCGGTCA GCAAAATCAG CCCTCGGCAC TCGCAAATTG CACTGCTGGC GATGGACATG
TCGAGCAATC AAGTGATCTT TAGCCAACAG GCCGAGACGC TGTTTATTCC CGCCAGCACG
CAAAAGCTAC TCACCGCTGT GAGCGCCATG GCTCAGCTTG GGCCTGATTT TCGTTATGTC
ACTGAATTAT GGACGGACGC ACCAATACGC AAGGGCCATA TCGCCGGCAG CGCTTATTTA
CGTTTTAGTG GCGATCCGAC GTTCACTCAA GCCGATCTCA AGGCCATTTT TGCCAGTCTC
GTGAAACAAG GCATTAATCG CATTGATGGA CATCTGTATT TGCTCGGCGA TAAACAAGAG
CAAATGCAAG CCCCTGGTTG GGTTTGGGAT GACTTAGGCA TTTGTTTTGC CGCGCCTGTG
TCGAGTTACA TTATCAATCA GAACTGCGTC TATGGTCAGT TCAACCCCAG CACGGCCAAT
AAACCATCGC AGGTGAGCCT GCGCACGGGG AGTTATGGGG TAAAAGTCAG CAGCGATGCG
GTATTTGATC CCAAGGCGAG TCGTGAATTT TGCCAGCTCG ATTTGGTGCG ACTAGGCCAA
AACAACTATC ATCTGCGTGG TTGTTATCCG GGCGGTGAAG CGATTGGACT GGCAATTGCA
GTCAGCGATC CGTTCAAATT TGCCCAAGAT AACCTCATCT CGCTGCTCAA AGGCGAGATG
TCACTGGCGG GTAAAGTTAA GCTCGGCACT AGCTTGCCCA AAAAGGCGAA ACTGATTGCC
AGCCATAGCT CGGCGCCTCT GCCTGAATTG CTCGATACTA TGCTGCTCAA GTCGGATAAT
TTGATTGCTG ATAGCCTGTT TAAACAGCTT GGCAAAAGTT ATTTCAATGC CCAAGGTAGC
TTTACTAATG GCGCGGCAGC CATGCAGCGG ATTTTAACGG AGTTAGGCGT CGATCTGAGT
AACGCTAACA TTGTCGATGG TTCAGGGCTG TCACGCTATA ACTTGCTCAA TGCCCAGCAG
TTAGCGGCGG TATTGGCACT CATCCATAAG GACAGCCGCT TTAGCCCGTT AATAACCAGT
CTGCCGCAAG CAGGAATAAG CGGCACCTTA AGGTATCGCA TGGGTTACAA CAAGCCGCCG
CTGAAACAGC AAATTTTTGC TAAAACAGGC TCGATGCAAG GCGTGTCTAA CTTAGCGGGG
TTTATCCGTT TGCCTGAGCA CAGTGACACC CTGTTTGTGG TGCTTGAGAA TGGCATGAGT
CCCGAGCTTA AACATCAGCA TAAACCATCG TTTAATGCCG AGTTTCTCAA GCAATTGATT
TCAGTGCTGC AAGTGCCATC CCCCACCACA GCAGCGCTTA GTACCGCAGC TCACTCGGTC
CAAGATTAA
 
Protein sequence
METLLKTTLY ASLLLATSHN IARAEQIDAG AIETQTTSLS QAVSKISPRH SQIALLAMDM 
SSNQVIFSQQ AETLFIPAST QKLLTAVSAM AQLGPDFRYV TELWTDAPIR KGHIAGSAYL
RFSGDPTFTQ ADLKAIFASL VKQGINRIDG HLYLLGDKQE QMQAPGWVWD DLGICFAAPV
SSYIINQNCV YGQFNPSTAN KPSQVSLRTG SYGVKVSSDA VFDPKASREF CQLDLVRLGQ
NNYHLRGCYP GGEAIGLAIA VSDPFKFAQD NLISLLKGEM SLAGKVKLGT SLPKKAKLIA
SHSSAPLPEL LDTMLLKSDN LIADSLFKQL GKSYFNAQGS FTNGAAAMQR ILTELGVDLS
NANIVDGSGL SRYNLLNAQQ LAAVLALIHK DSRFSPLITS LPQAGISGTL RYRMGYNKPP
LKQQIFAKTG SMQGVSNLAG FIRLPEHSDT LFVVLENGMS PELKHQHKPS FNAEFLKQLI
SVLQVPSPTT AALSTAAHSV QD