| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2051 |
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| Symbol | |
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| ID | 7088344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2425043 |
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| End bp | 2426890 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460954 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_002357978 |
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| Protein GI | 217973227 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00884416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000873335 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTA ACCCATCGTT TTTCAAGAGA ATATGTTTGT TTATTTGGCA CACCCTCAAC
GGGACGCGTA AACTAATCCT CAATCTGATC TTTTTTGGCA TCTTAGCCGC CATTATCATC
TCCATTGGCA GCAGCGAAGA TATCCAAGTA GAAGACAACT CGGCGCTGGT GCTTAATCTG
GCCGGCTCGA TTGTCGATCA GAAACAACAG GTCGATCCCT TAGAAGCCGC ATTCAAGCAA
GGCCAAAATG CCAACGCCGA TGGGGAAATC CTGCTAGCCG ATGTGCTGTA TGTGATTGAC
AATGCCGCGC AAGATCAAAG GATTAGTACC CTAGTACTTG ATCTAGCCGA TTTGAAACGT
GCCGGGATCA GCAAGCTGCA ATCTATCGGT GATGCACTTA ACCGCTTTAA AGAAAGCGGT
AAAAAAGTGG TCGCCATCGG CAATTACTAC GAGCAAAATC AATATTTCCT CGCCAGCTTT
GCCGACACCA TTTACCTCAA TCCCCAAGGC GGCGTGTCGC TTGATGGCCT GAGTATGTAC
AACCAGTACT TCAAATCGGC CTTAGATAAA CTCAAAGTTA AAGCGCATAT TTTCCGCGTA
GGGACTTTTA AATCTGCGGT TGAACCCTAC ATGCGTGACG ATATGTCCGA CGCCGCTCGC
GAAGCCAGCA GTGCGCTTTT AGCGGATGTA TGGCAAAGCT ACACCCAGAC TGTCGCAGGC
AATCGCAATA TTGAGCCTAA CTCGCTGGTG CCCGATGCAA CCACTTATTT GGCCGAGCTC
GATAAAGCCA ATGGTGACTC TGCGGCGATG GCCATCAACA TGAAATGGGT TGATAGCTTA
GCGACCACGG AAGATTTTCG TCAAACCATG TTAGAAACCG TGGGCAAGGC CAGCAGCGGT
GACAGTTTCA AGCAAGTGAG TTTTTATGAT TATTTAACCT TAGTGACGCC ATTGCCAAGC
TTTGTTGAGC AAGACAGTGT CGGCATAATT GTGGCGAGCG GTACGATTCT GAACGGCACT
CAACCTGCGG GCCAAATCGG CGGCGAAAGC ACTGCCGAGC TGCTACGTAA GGCACGTTTC
GATAAACACG TTAAAGCCTT AGTGCTGCGC GTCGATAGCC CTGGCGGTAG CGCCTTTGCC
TCGGAGCAAA TTCGTCAAGA ATTACTGGCA CTTAAAGCGG CTGGCAAACC TGTTGTCGTC
AGTATGGGCA GTTTAGCCGC ATCGGGTGGT TATTGGATTT CAGCCAGTGC CGACTATATC
TTCGCAACGC CAACCACGCT TACGGGCTCA ATTGGGATCT TCGGCATGAT CACCACCTTC
GAAGATTCTC TGGCCAGTAT AGGCGTGCAT ACCGATGGCG TATCAACGTC GGAATGGGCG
GGATTGTCTG TGACACGCAC GCTGTCACCG CAAGTTGAAG CGATTATCCA ACGTCATATT
GAACGTGGCT ATTTAGACTT TATCTCGCTG GTCGCTAAAG AACGCAAGAT GACCATAGAA
CAAGTCGATA AGATTGCCCA AGGCCGTGTT TGGAGTGGTA AAAAAGCCCT TGAGCTTGGC
TTAGTCGATG AACTGGGTGA TTTAGATGAG GCGATAGCTA AAGCCGCTAA ACTCGCGGAT
ATGACACTAT TTGACACCCG CGTTATCGAA CAAGAGCTGA CACCCGAGCA ACGCTTTATG
CAACAGATGT TTGCCTCAGT ATCGAGCTAC CTGCCCGCCT CACTGAGCCA ATCATCGATG
TTAGAGCAAA TGCTGCAGCA ATGGACCAGC AGCTTGAAAA CGTTAACCTC TTTTGATGAT
CCAAATAACG TCTACATCTA CTGCGATACT TGCAACATGA TGAACTAA
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| Protein sequence | MSANPSFFKR ICLFIWHTLN GTRKLILNLI FFGILAAIII SIGSSEDIQV EDNSALVLNL
AGSIVDQKQQ VDPLEAAFKQ GQNANADGEI LLADVLYVID NAAQDQRIST LVLDLADLKR
AGISKLQSIG DALNRFKESG KKVVAIGNYY EQNQYFLASF ADTIYLNPQG GVSLDGLSMY
NQYFKSALDK LKVKAHIFRV GTFKSAVEPY MRDDMSDAAR EASSALLADV WQSYTQTVAG
NRNIEPNSLV PDATTYLAEL DKANGDSAAM AINMKWVDSL ATTEDFRQTM LETVGKASSG
DSFKQVSFYD YLTLVTPLPS FVEQDSVGII VASGTILNGT QPAGQIGGES TAELLRKARF
DKHVKALVLR VDSPGGSAFA SEQIRQELLA LKAAGKPVVV SMGSLAASGG YWISASADYI
FATPTTLTGS IGIFGMITTF EDSLASIGVH TDGVSTSEWA GLSVTRTLSP QVEAIIQRHI
ERGYLDFISL VAKERKMTIE QVDKIAQGRV WSGKKALELG LVDELGDLDE AIAKAAKLAD
MTLFDTRVIE QELTPEQRFM QQMFASVSSY LPASLSQSSM LEQMLQQWTS SLKTLTSFDD
PNNVYIYCDT CNMMN
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