| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2039 |
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| Symbol | |
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| ID | 7086873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2409096 |
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| End bp | 2411834 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460942 |
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| Product | diguanylate cyclase with extracellular sensor |
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| Protein accession | YP_002357966 |
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| Protein GI | 217973215 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0269682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000244551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCCGACG AGCCATTAAT CGTGGTGATG GGTGAAGATA GCTTTCCCTA TCAATATGTC
GACAACGATG GTGAGCCGAC CGGACTACTG GTCGATTTAT GGAAAGAGTG GGCGAAACAA
AGCCATACCC AAGTGGTTTT TGTGGCGCGC CACTGGCACG AGTCCCTTGA GCAACTGCGG
CAAGGTAAGG CGCAAGTGCA TATCGGCATG GGGAAAACCC CAGAGCGTGA GCAAGAGTTC
GACTTTGCTG AGCCCATCGC CGATGTCGGC ACTTTTTTAT ATCTGCATAA ATCCCTGCAG
GGTAAAAAGT CCATTAAAGA ACTCATTCCC TTTCAAATTG GTGTGGTGGC GGCTTCATCC
CACGAAGCGG AATTGCACCG TATCGAACCG CAGCTCGTGT TTAAACGCTA CGAAAGTCGT
GAGAAATTAC TCGCTGGGGT CGCAGCCGGC GAGATTATGG TGTTTGCGGG CTTAGAAGGT
TATTTGAAAG ATCCCGCTTC ATCCCAAGAG ATTGCCGCGA ATTATCCCAA TACGGCGCGT
ATCCAAATTA AGGCGATGCA ATTTGTTCCT GCGGTCAAAA AGGGCAATCT TGATTTAGTT
GATAGGATCA ATAAAGGTTT CACCGCGCTC GATCCGCACT TTATCCAACA AACTGAGCGA
CGTTGGCTTG GCTATCAACG TCAACAAGCA GGGATTGTAA TTTCCATGCA ACTGGGCGCC
GAGCCTTTTG TGGATTTAGG TGTTGATGGT TTACCCCATG GCTTGTATGT GGACATGTGG
CAATTGTGGT CCGAGAAAAC GGGTATCGCC GTTGATTTTA TTTCTGGCGA TATGAACTCC
AGTGTGGATG ATGTTCGTCG TGGTCTTGCC GATGCGCACA TTGGTTATCC AGAGAGTGAT
GATGTCAAAA CGGGGCTTAA TCGGGCTTGG CACTTATATA CGGTTAAGAG CCGCTTGTTT
CTCTTTCAGC AGCAGTTGAC CGATTTAGAC AGCTTAAAAG GTAAACGTAT TGGTGTGGTG
CCGACGGCGC CTTATCTGGT GGAGTTACGT AAAGCCTTAC CCCAAATGGC ACTGCGTTAT
TACGACAATA TGGATGCCAT GGTCGCGGGC GCAAGATCGG GCGAGATTGT TGGCTTTGTG
GCTTCGGGTG CATGGACATC CCATTATTTA CTGCTCAATA AAGGCTGGTC TGACTTTAGT
CAGTATCCCA ATCTCGAATT TAGCACCAAC ATTTATGTGC TGACTCGCAG TGATGATCCT
GGTCTGACGC AGCGGATCGC CAATGGCTTT AACAATATTA GCAATCAAGA GTTTGCCGAT
ATTGAAAATA AATGGATGCT CAATCCCAAA GATCATGTTT TTACCCAAGC TGAGCGCCAT
GTCAGCCTAA GCCCAGCAGA ACAGGCCTAT GTGGAAAGTG TAGGCGAGCT TAAAGTGGGC
TATTTAAAGC AGTGGCCGCC GATGGAGTTT ATGGATGAGC AGGGCGAGTT TGCGGGGATC
AATAGCGATA TCGTCAAATT ACTCAAGGAA CAGCTCAAAC TTAAGCTCAT GCCCGTTGCC
TTTGATGATT GGCATTCGTT AATCGACGCA CTGCAAAAGG GCGAGGTGAG TTTAGCCGGC
AGTGTCGCCC AAACGGCAGA GCGCCAGCAG CGTTTAGCGT TTAGTGAGGC ATATTGGCCA
TCGCCGTGGG CATTAGTGTC GCAATTGGAG CAAGTCTCGG TATTCAATAT TGCCCAGCTC
GCAGGACAAA GGGTAGCTGT GGTCGAGGGC TATCATTTGG TGGCCCAATT GATGAGTCTG
GAACCTTCAC TCAAGTTAGT GATAGTGCCA AATACGCAGG CGGGATTGGC GGCGGTAACG
AATGGCAATG CGGATGTGTT TATCGATAAA GTGGTGACAT TGGCCTCTGA GCTTAAAACC
AGCCACTACC CGACACTGAA AATGTCGCTG CTGAGTGATC TTGCCGATCA GCATAGCCAT
ATTGGTGTTT ATCCTCAATT TGCGCCGCTG GTGCCACTGA TTAACAAAGC CTTAGCCTTG
ATTGACGCTC AGCATCAGCA GCAAATTTAT GCGCGTTGGG TGTCATTTTC TGTCGCGACA
GAGAGCGTTA AATATCAGCT ATGGCTGCGT TATATCGTAT TTGGCGTGAT TATTTTGTGC
TTAGTGATGG TGGCAGTGTT GTTAGTGAAT CGCCGCTTAA ATCGTGAGAT CACCCAGCGA
TTAGTCGCTG AAAAACGTTT GTTGCATGTG GCGAACCACG ATGCTTTGAC TCAGTTACCT
AACCGCGCCT TGCTCGATGA CAGATTAGCC CAAGCTTTAT TGTCCCATCA GCGCGAGCAA
GCGCATTTTG CCTTGCTATT TATCGATCTG GATGGGTTTA AACAAATCAA TGATCAACAT
GGTCATCCGA TTGGCGATGA ATTACTGGTA CAGGTCGCCC AAAAGTTAAC CAAAGTTATC
CGTGGCTCAG ATACCGTGGC GCGATTTGGC GGCGATGAGT TTGTTATCCT GCTAAATCGT
GTGCAAGATC TCGATGCTGC AACCCAAGTT GCTGATAATA TTCTACAGGC ACTGTCGAGC
CCTTTGCTTA TTCAAGGCGT CAGTGTCAGC ATAGCGGTCA GTATGGGCGT GGTGATTTAT
CCCCGCGATG GTGATACCGC GATAGGCTTA TTGAAAAAAG CCGATCAACT GATGTACCAA
GCAAAAAGTT GCGGCGGGCG TTGTTATCGC TCAGCTTGA
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| Protein sequence | MPDEPLIVVM GEDSFPYQYV DNDGEPTGLL VDLWKEWAKQ SHTQVVFVAR HWHESLEQLR
QGKAQVHIGM GKTPEREQEF DFAEPIADVG TFLYLHKSLQ GKKSIKELIP FQIGVVAASS
HEAELHRIEP QLVFKRYESR EKLLAGVAAG EIMVFAGLEG YLKDPASSQE IAANYPNTAR
IQIKAMQFVP AVKKGNLDLV DRINKGFTAL DPHFIQQTER RWLGYQRQQA GIVISMQLGA
EPFVDLGVDG LPHGLYVDMW QLWSEKTGIA VDFISGDMNS SVDDVRRGLA DAHIGYPESD
DVKTGLNRAW HLYTVKSRLF LFQQQLTDLD SLKGKRIGVV PTAPYLVELR KALPQMALRY
YDNMDAMVAG ARSGEIVGFV ASGAWTSHYL LLNKGWSDFS QYPNLEFSTN IYVLTRSDDP
GLTQRIANGF NNISNQEFAD IENKWMLNPK DHVFTQAERH VSLSPAEQAY VESVGELKVG
YLKQWPPMEF MDEQGEFAGI NSDIVKLLKE QLKLKLMPVA FDDWHSLIDA LQKGEVSLAG
SVAQTAERQQ RLAFSEAYWP SPWALVSQLE QVSVFNIAQL AGQRVAVVEG YHLVAQLMSL
EPSLKLVIVP NTQAGLAAVT NGNADVFIDK VVTLASELKT SHYPTLKMSL LSDLADQHSH
IGVYPQFAPL VPLINKALAL IDAQHQQQIY ARWVSFSVAT ESVKYQLWLR YIVFGVIILC
LVMVAVLLVN RRLNREITQR LVAEKRLLHV ANHDALTQLP NRALLDDRLA QALLSHQREQ
AHFALLFIDL DGFKQINDQH GHPIGDELLV QVAQKLTKVI RGSDTVARFG GDEFVILLNR
VQDLDAATQV ADNILQALSS PLLIQGVSVS IAVSMGVVIY PRDGDTAIGL LKKADQLMYQ
AKSCGGRCYR SA
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