| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2025 |
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| Symbol | |
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| ID | 7086859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2392674 |
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| End bp | 2394626 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643460928 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_002357952 |
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| Protein GI | 217973201 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00308953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGGGTA TTCATGGGGA TAATGTGCCC ATGAATACCG AGCGTCCCGC GTTTGTCTGG
ACCATAGCTG GTTCAGACAG TGGCGGTGGT GCCGGTATTC AGGCGGACTT AGCGACAATT
CAAGATTTGG GCTGTCACGG TTGCAGTGTG GTCACCACAG TGACGGCGCA AAGTTCTGTG
GCGGTCACTT TAGTCGAGCC CGTATCAGCG GCGATGTTAA TGGCTCAGCT GACGACTTTA
CTTTCCGACT TGCCACCCAA AGCAATTAAA ATCGGCTTAC TGGCAGATCA AACTCAAGTG
GCATTGCTGG CAGATTGGAT CGCGAGTTTT AAAATCCACT ATCCATCTGT GCCTGTGATT
GTCGATCCTG TGATGGTCGC CAGTTGTGGC GATGCTTTAG CAGTCGATAA CTGTCAGGAT
ATAAAAAGTG CGGCCAAATC AGCCTTAGAT TTTAAGCATT TCAAAGGTTT AATCGAACTT
ATAACGCCCA ATGTGCTTGA ACTTGGGCGG TTAACTCACA GTGATGTTTC AACGAAAGCG
CAATTCGCTG CCGCGGCACT GGCTTTATCC CAGAGCCTTG ATTGCAGTGT GCTCGCCAAA
GGTGGCGATG TGAGCTTTGG CAGCACTGAC ATTCTTGATG ATACTCATGC TCAAACTCAC
GATAACACTT ATGCTCAAAC TCAGGCTAAC GTTCATGTTA TCGCTCTTGA TAGCAACGGC
TGGGACCTTG AACTTGCCGA GGATTATCTA GTTTGTCGTC AAGTACGCGC GAGCTCTAAA
CTACATCAAA ACGGGCGTTT CTGGTTAGCC AGCCAGCGGG TTAATACCCG CCATAATCAT
GGTAGCGGCT GCACTTTGTC ATCAGCCATT GCTGCCGTGT TAGCGCAAGG TTTTGTATTG
CAAGATGCGG TGGTTGTTGC GAAAGCTTAT GTGAGTCAAG GCTTAAGCGC GGCGATTGGT
TTAGGGCAAG GTCCAGGGCC GTTGGCCCGT ACGGGTTGGC CTAATAACTT GTCCCGCTAT
GCCAAGATAA ATCTGTGTGA TGGCAATTTT ATTAGTCATC AACTCAACCA ACACCTTGAT
GTTTTAAATG ATTTAGTTGC AACAGTTTTA TCCGCAACAG ATCAGGCAAC CGCTCAGGTA
AAAATAGCCT CGACGCCACC TCAAAATATT TTATCCCACG GTTTTAAAGT GCTCGATGCC
GATCTTGGTG TTTATCCCGT GGTGAGTGAC TTAACCATGC TGGAAAGTTT ATTAGCGGCA
GGCGTTAAAA CCGTCCAGTT ACGGATAAAA ACCGATTCCA GCGAGTCAAC CGCTGCAGCG
TTAGCCGAAT CTGATTTAGG TAAATCTGCG CTAAGTAGAT GTGAGTCAGG CAAATCTAAG
TCAGGTGAAC CTGAGTTAAT TGGCTCCGAA TTAGAAGCAC AAATTCAAAC GGCCATTGCC
TTAGGCAAGC ATTTTAATGC GCAGCTTTTT ATCAATGATC ACTGGCGGTT AGCGATAAAA
TACCATGCCT TTGGGGTACA TTTAGGCCAA GAAGATCTCG CCGTTACTGA CTTAGCGGCC
ATTCAAGCCG CGGGGCTCGC GCTAGGCATA TCGAGCCACA GTTACTTCGA GTTGCTATTG
GCGCACCAAT ACTCGCCATC CTACATAGCG CTTGGGCATA TATTCCCAAC CACGACGAAG
CAAATGCCTT CGGCGCCCCA AGGGCTCGCA AAACTTAAAC ACTATGTGGC GTTACTCCAA
GGCCATTATC CCTTGGTCGC CATTGGCGGT ATTGACTTAA CAAATCTGGC AAAGGTGAAA
GCCACGGGGG TGGGCAATAT TGCTGTGGTG CGCGCAATAA CGAACGCTAA GGATCCGTTA
GCCGCCTTTG CAGAGCTGAG CCAAGCTTGG GAGCAATGTA GCTTGTCTGA AGAACTGGCT
GTAAACCATG AGTTGGGTGC TAAGCATGAG TAA
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| Protein sequence | MLGIHGDNVP MNTERPAFVW TIAGSDSGGG AGIQADLATI QDLGCHGCSV VTTVTAQSSV
AVTLVEPVSA AMLMAQLTTL LSDLPPKAIK IGLLADQTQV ALLADWIASF KIHYPSVPVI
VDPVMVASCG DALAVDNCQD IKSAAKSALD FKHFKGLIEL ITPNVLELGR LTHSDVSTKA
QFAAAALALS QSLDCSVLAK GGDVSFGSTD ILDDTHAQTH DNTYAQTQAN VHVIALDSNG
WDLELAEDYL VCRQVRASSK LHQNGRFWLA SQRVNTRHNH GSGCTLSSAI AAVLAQGFVL
QDAVVVAKAY VSQGLSAAIG LGQGPGPLAR TGWPNNLSRY AKINLCDGNF ISHQLNQHLD
VLNDLVATVL SATDQATAQV KIASTPPQNI LSHGFKVLDA DLGVYPVVSD LTMLESLLAA
GVKTVQLRIK TDSSESTAAA LAESDLGKSA LSRCESGKSK SGEPELIGSE LEAQIQTAIA
LGKHFNAQLF INDHWRLAIK YHAFGVHLGQ EDLAVTDLAA IQAAGLALGI SSHSYFELLL
AHQYSPSYIA LGHIFPTTTK QMPSAPQGLA KLKHYVALLQ GHYPLVAIGG IDLTNLAKVK
ATGVGNIAVV RAITNAKDPL AAFAELSQAW EQCSLSEELA VNHELGAKHE
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