Gene Sbal223_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2020 
Symbol 
ID7086854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2385612 
End bp2386172 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content49% 
IMG OID643460923 
ProductDTW domain containing protein 
Protein accessionYP_002357947 
Protein GI217973196 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.443073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00543273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATTA TTTTATTGAC CCACGAACGC GAGTTAAGCC GCAAAACAAA TACTGGCCAA 
CTCGCGTTAG CCGCATTCCC TGAAGAGGTG AAAAGCATCG TCTGGTCGAG AACGGCACCT
GATAACGATT TAGTGGCTAT GTTGGCATCG CAGCAGGCTA AATTGTTGTT TCCTGCAAGT
GATACTGAGC CCGCTGTGCC CATTGATCAA AATGCCTTAG ATACTGATTT AGCTGAGTCG
ACGCTCTCGA ACGCACAAGC CTTTTTAGCA CCAGCGCAAT CTATAGTGAT AGCAGAACTA
ATGCCGAGCC AAGTGGTGAT TTTAGATGCG ACCTGGCAGG AGGCGCGTAA GATGCTCCGC
CAGAGCGCCT ATCTTAAAAC GGCTGCACGA GTTAGTTTGC CGCCACTTAT GCCTGAATCC
GCTTTTATAT TGCGGCGTAA TCAGCAAGAA GGAGGCTTGT GCACTGCAGA GTGCATTATT
GCGCTTTGGC GCCAGTGTGG CAGAGCAGAA CAAGCGACGC TATTAGCGTC GCTGTTTACT
GAATTGAATA GCCGTACTTG A
 
Protein sequence
MQIILLTHER ELSRKTNTGQ LALAAFPEEV KSIVWSRTAP DNDLVAMLAS QQAKLLFPAS 
DTEPAVPIDQ NALDTDLAES TLSNAQAFLA PAQSIVIAEL MPSQVVILDA TWQEARKMLR
QSAYLKTAAR VSLPPLMPES AFILRRNQQE GGLCTAECII ALWRQCGRAE QATLLASLFT
ELNSRT