Gene Sbal223_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2019 
Symbol 
ID7086853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2384876 
End bp2385418 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content50% 
IMG OID643460922 
ProductNUDIX hydrolase 
Protein accessionYP_002357946 
Protein GI217973195 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.172298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00570807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACGA CTATGCGTTT ATTGAGAACC ACCCAAGATC CAGCGGTTAA CCTGCAGACG 
GCACGCGTTT TTTATCGCAG AGCTGCCCGC GCGATTGTGT TATCGGGTGA AGACATTTTG
CTGCTGTATA CTCAAAAATA CCGCGACTAC AGCTTACCCG GCGGCGGAAT TGACGACGGC
GAGAGCCTCG AAGACGGGCT GATCCGTGAG CTACAGGAAG AAACCGGCGC CCTAGACATT
CAAGTGTTAG CCCCCTTTGG TCGTTACGAA GAGTTTCGGC CTTGGTACCG TGAAGGGGCG
AACGTAGTGC ACATGGAGTC ATTCTGTTAT GTGTGCCGTA TCGACACCGC ACTGGGCGAG
CGTGGTTTAG GTGAGACTCG ATTAGAAGCC CATGAGATAA AAAATGGCAT GCGGCCTGAA
TGGCTTAATA TTCATCAAGC TATCGCCCAT AACGAAGATA TTCAGCGCAA TCATCCCCAT
AAAGGCCAAT CAATAGAGCG TGAAACTTTT CTGCTAAAAC AGATAGTGTT GGAATGTTTG
TAA
 
Protein sequence
MATTMRLLRT TQDPAVNLQT ARVFYRRAAR AIVLSGEDIL LLYTQKYRDY SLPGGGIDDG 
ESLEDGLIRE LQEETGALDI QVLAPFGRYE EFRPWYREGA NVVHMESFCY VCRIDTALGE
RGLGETRLEA HEIKNGMRPE WLNIHQAIAH NEDIQRNHPH KGQSIERETF LLKQIVLECL