Gene Sbal223_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2014 
Symbol 
ID7086848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2378543 
End bp2379550 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID643460917 
Producthypothetical protein 
Protein accessionYP_002357941 
Protein GI217973190 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00622676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATTC AAACGCTGTT ATCGACGGCT CTGGCGAAAC GCCATGATTT TTTACAACAA 
GCAGAACAGG ATCAAACCGA TTGTTTTCGG GTGTTCCATG GCACAGTAGA AGGCGTGAGT
GGCTTGAATG TCGACCGTTA CGGCGATGCT TGGCTAGTGC AGAGTTTTCA TCAGACCTTA
ACCGATGAAG AGTTAGCCGA TGTTAGCGCC GTTTTGCTGC AACAGGCCGA TTTGCCGATT
GTGTATAACG ACCGCTCATT AGGCAATTCC CGCGTATTGA ACGCGTTATC ACCGGCACTG
ACAGAGATCG CGAGTTCTGA GCGAGTCATG CAGGAAAATG GCATCAAGTT CAGCACTAAA
CTGCGTCACG AAGGACAAGA TCCGCTGTTA TTCCTCGATA TGCGCATTGG TCGTGAATAT
GTACGGGCAA ACAGCCAAGA TAAAACCGTG CTGAATTTGT TTTCCTACAC TTGCGGCATT
GGTACAGCGG CAGCCATCGG CGGCGCGACC CGGGTGATGA ACGTCGATTT TTCTTCCTTT
GCTTTAGCCA CGGGCAAGGC GAATGCGGCG TTAAATCAGG TGTCCAATGT GTGTGAGTTT
GTGCAGAGTG ATGCGTTTCC GGCATTGCGC CAATTGGCTG GTTTAAGTGT GGGAGGGCGC
CGTAATCAAA AATTACCGAG CTTCCCAAAA TTGCCGCAAA CCCAGTTTGA TCTCGTGTTC
CTCGATCCGC CGCGTTATGC CAAGAGTGCT TTCGGTATTG TTGATTTGAT CAATGATTAT
CAAGGTTTAT TTAAGCCCGC ATTAATGGCG ACTAAAGTCG GCGGCACTAT CGTTTGCTGC
AACAATGTGG CGAAAGTTGA GCGCCAAGCA TGGTTTGACA GTTTAGTACG CTGCGTTGAA
AAACAAGGCC GCACAGTCAC AGCGCACACT TGGCTTGATC CCCATGAAGA TTTCCCTTCG
TTCGATGACA ATCATCCACT TAAAATTGTC GCGCTGACCT TAAGTTAA
 
Protein sequence
MSIQTLLSTA LAKRHDFLQQ AEQDQTDCFR VFHGTVEGVS GLNVDRYGDA WLVQSFHQTL 
TDEELADVSA VLLQQADLPI VYNDRSLGNS RVLNALSPAL TEIASSERVM QENGIKFSTK
LRHEGQDPLL FLDMRIGREY VRANSQDKTV LNLFSYTCGI GTAAAIGGAT RVMNVDFSSF
ALATGKANAA LNQVSNVCEF VQSDAFPALR QLAGLSVGGR RNQKLPSFPK LPQTQFDLVF
LDPPRYAKSA FGIVDLINDY QGLFKPALMA TKVGGTIVCC NNVAKVERQA WFDSLVRCVE
KQGRTVTAHT WLDPHEDFPS FDDNHPLKIV ALTLS