Gene Sbal223_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2010 
Symbol 
ID7086844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2371771 
End bp2374347 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content51% 
IMG OID643460913 
ProductGlucan 1,4-alpha-glucosidase 
Protein accessionYP_002357937 
Protein GI217973186 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID[TIGR01535] glucan 1,4-alpha-glucosidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00769756 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000340276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATCGA GTCCTACGCC GCAGCAGGAT CTGCACACTA GCCAAACCCG TCACGCACAA 
ACGTTAACAA GGCGCAGCCG CCTAGCGCTT GCCGTCGCCG CAAGTCTATT AGGGACAATA
GGATTCACTG CTTGTTCACC CACATCGAAT TCAGCAACAC CAAGCATGAG TGGCAATGCC
GCATCAAATG TGCAGCTGGT TGCGCCCGGC GCACCGGGTA AAGCACCGAC TTGGGCATTT
TCGGGTAAAA CCGGTATTGG AACGTCGTAC GAGCCTTACA CCCAAGGTCA ATACCAAGAT
GCCAAGCAGA ATCCTATTAG CCGCGTTTGG TTCTCCCTCG CCCAAGGTAT TTTAACCGAA
ACCATGTATG GTCTTATTCA CAATGCGCAG CTCAAAGAAC TGCAATTTGT GATCACGGGA
AATGGCTTTG TCGATACAGA AAAAGATAAC ACCATCAGCA GCATAGAATA TTTAGATACA
GATGCTAATG GTCGCCCACA ATCCCTTGCC TATAAAATTA TCAATAAAGA TATTGAAGGT
AAGTATCAGA TTGAAAAGCA TATCTTTACC GATCCTGACC GCGACACCCT AATGATGCGC
GTCACCTTTA CCGCCTTTGA AGACGGCATT ACGCCGCATT TGTATGTCAA TCCGCATATC
GATAACGCGG GCGCCAATGA TATCGGCCGC ATCGACACTA ATACAGACAA TCATACCAAC
ACACATGCTG GCAATCAGGC GCTGGTGGCC TATACCGCCG CCAAAGACAG CAGCGTGATG
ACGGTCAAAT CCGAGCTGAA TTTTGTGCAG GCAACGACAG GCTTTGTCGG TGTCTCCGAT
GGCCTAGCCG ATTTGGCCGA TAACGGCACA CTCGATACGC CCTATCAAAC GACCAGTGCG
CAAGATAAAT CGACCGTTGG CAATATCGCC TTTACTGCGA GTTACCCTAC GCTCATCAAA
GCCAAACCCG TCACTTTTAA TCTCGCCATC GGTTTTGGTA AAGATGAAAC CCAGAGTTTA
GCCAATGCCG ATGCCACTTT GGCCGCAGGT TATGATGCTG TGCTGAGCGC CTATAAAGGC
GATGCCACCC ATGTCGGCTG GCACGATTAC TTAAGCTCGC TGCCCGCCAT CGCAAACATG
GCCAACAACA CCACAGATAG CGGTAAGCTG CTGTATACCA GTGCTATGGT CTTGAAAGCG
CAGGAAGATA AAACCTATGC GGGCGCACTT ATCGCCTCGT TATCCAATCC TTGGGGCGAT
ACGGTTTCAG CAGCCGTGCC GAGTACTGGC TATAAAGCGG TATGGCCGCG TGACTTTTAC
CAATGTGCCA TGGCATTCCT CGCCATGGGT GACACCCAAA CGCCCAAAGT GGCCTTCGAA
TACCTGGAAA AAGTGCAAGT GACCGAAATG ACGCCCGGCT TTACGGGTAC GCCGGGTTGG
TTCCTGCAAA AGACCCATGT GGATGGCCAA ATTGAGTGGG TTGGTGTGCA GCTCGATCAA
ACCGCCATGC CTATCATGCT CGGCTGGAAA CTCTGGCAAG CGGGTGTGCT CACCCCTGAT
GAGATCAGTC ACTGGTATCA AGAGATGCTC AAAGGTGCTG CAGACTTCTT GATCAGTGGC
GGTGAGGTCA ATCTGGATTG GAATCACACT CAAATCGCCC CGCCAAAAAC CCAGCAAGAG
CGTTGGGAAG AACAAGCGGG TTACTCACCC TCGACCACGG CCGCAGTGAT CGCAGGTCTT
GTTGCCGCGA GTGAAATAGC CAATGAAGCC AAGGATCCCG ACTCCAGCAG CCGTTATCTT
GCCGCCGCCA AAGACTTAAG TAATAGTTTA GAAAAACACT TAGTCACCAC CCAAGGACTA
CTAAAAAACA GCGCAGGCGT CAGCGCGCCT TACTATTTAC GTTTAAGCCC GAATGGCGAG
CCAAACACCG CCGATACACT GGCGGCGAAT AACGGTAAGC AAGGTTTAGA TCAGCGTCAG
ATCCTCGATG GCGGATTTTT AGAACTAGTA CGTTATGGCG TGCGCGGTGC AACTGATAAG
CTGATCAATC AAAGCCTTCA ATTGATTGAT AACACTGAAC TTGACTCTAA TTTGCGCCTT
AAATATGAGT TTACCGCTAA AGATGGCAGC AAAATCCCAG GCTTTAGACG TTATGGCAAC
GATGGCTACG GTGAGGATAC GGTTTCTGGC AAGAACTATG CGGAATCGGG CAGCAACAGC
GCCGATCAAC GTGGCCGCGT CTGGCCCTTC TTCACCGGTG AGCGCGGTCA TTTTGAATTA
GCACTCGCCC AAGAAAAAGG CGAGCTAACA GGCAATAACT CGCAGCAAAC CAAGCAGCAT
TTGATCAACA CCTATGTGCA AGGCATGGAA ACGTTTGCGA ATGCGGGCAT GATGTTACCC
GAGCAAGCGT GGGACGGTGT CGGCGATGCC ACCCGCTACC ATTACCAACT CGGACAAGGC
ACTAACTCAG CCACGCCGCT AGCCTGGACC CATGCCGAAT ACATTAAACT GGTGCGCTCA
ATGACCGACG GCCAAGTCTG GGATAACTAC CCTATCGTCC CAGCGGCATT GAAATAA
 
Protein sequence
MESSPTPQQD LHTSQTRHAQ TLTRRSRLAL AVAASLLGTI GFTACSPTSN SATPSMSGNA 
ASNVQLVAPG APGKAPTWAF SGKTGIGTSY EPYTQGQYQD AKQNPISRVW FSLAQGILTE
TMYGLIHNAQ LKELQFVITG NGFVDTEKDN TISSIEYLDT DANGRPQSLA YKIINKDIEG
KYQIEKHIFT DPDRDTLMMR VTFTAFEDGI TPHLYVNPHI DNAGANDIGR IDTNTDNHTN
THAGNQALVA YTAAKDSSVM TVKSELNFVQ ATTGFVGVSD GLADLADNGT LDTPYQTTSA
QDKSTVGNIA FTASYPTLIK AKPVTFNLAI GFGKDETQSL ANADATLAAG YDAVLSAYKG
DATHVGWHDY LSSLPAIANM ANNTTDSGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD
TVSAAVPSTG YKAVWPRDFY QCAMAFLAMG DTQTPKVAFE YLEKVQVTEM TPGFTGTPGW
FLQKTHVDGQ IEWVGVQLDQ TAMPIMLGWK LWQAGVLTPD EISHWYQEML KGAADFLISG
GEVNLDWNHT QIAPPKTQQE RWEEQAGYSP STTAAVIAGL VAASEIANEA KDPDSSSRYL
AAAKDLSNSL EKHLVTTQGL LKNSAGVSAP YYLRLSPNGE PNTADTLAAN NGKQGLDQRQ
ILDGGFLELV RYGVRGATDK LINQSLQLID NTELDSNLRL KYEFTAKDGS KIPGFRRYGN
DGYGEDTVSG KNYAESGSNS ADQRGRVWPF FTGERGHFEL ALAQEKGELT GNNSQQTKQH
LINTYVQGME TFANAGMMLP EQAWDGVGDA TRYHYQLGQG TNSATPLAWT HAEYIKLVRS
MTDGQVWDNY PIVPAALK