| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2006 |
|---|
| Symbol | |
|---|
| ID | 7086840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 2367124 |
|---|
| End bp | 2367543 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643460909 |
|---|
| Product | peptidase S24 and S26 domain protein |
|---|
| Protein accession | YP_002357933 |
|---|
| Protein GI | 217973182 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000362452 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCC TAGGCCGCTT CGCCAAACAT ACCCAATATC GGCTCTCGCT ATTTAGCTCC
TTGATTGCCG CAGGATTTCC GTCACCAGCC CAAGACTATG TAGAACAAAC ATTAGATCTC
AATGAGTTAT GCATCAAGCA TCCCGCCGCC ACGTTTTTTG TCAAAGTCCA AGGGGATTCG
ATGATCGAAG CGGGGATTTT CTCCGGTGAT ATTTTGGTGG TAGATCGCTC ATTACAGCCG
GCCCACGGGG ATACCGTTGT CGCAGCAGTC AACGGCGAGT TTACTGTAAA GCAATTACAG
CTGCGCCCTG TGGTGCAATT ACTGCCACGT AATGCCTTAT TCTCCCCGAT TGCCATCAAT
GATGAGTCTG AGTTAAACAT CTTTGGGGTG GTGACCAACG TGGTAAAAAA GCTCAAATGA
|
|---|
| Protein sequence | MMILGRFAKH TQYRLSLFSS LIAAGFPSPA QDYVEQTLDL NELCIKHPAA TFFVKVQGDS
MIEAGIFSGD ILVVDRSLQP AHGDTVVAAV NGEFTVKQLQ LRPVVQLLPR NALFSPIAIN
DESELNIFGV VTNVVKKLK
|
|---|
| |