Gene Sbal223_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2005 
Symbol 
ID7086839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2365853 
End bp2367127 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content49% 
IMG OID643460908 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002357932 
Protein GI217973181 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000515421 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCCCT CATTATTTGC CCTCGTCGAT TGCAATAATT TTTATGCCTC CTGTGAGCGG 
ATGTTTAGGC CAGATTTAGC TGGCAGGCCG ATTGTTGTGT TATCCAATAA CGATGGCTGC
GTCGTCGCCC GCTCGGCAGA GGCAAAACAA CTTGGCATTA AGATGGCGGT GCCTGTGTAT
CAAATCGCAA ACCAACTCCG CCAGCATCAC GTTGCGGTAT TCTCCTCCAA CTATGCACTC
TATGCCGACA TATCAAATAG AGTCATGACC ACCTTAGAGC AAATGGTACC GAAAGTAGAA
GTGTATAGTA TTGATGAAGC GTTTTTAGAC CTTTCTCGTC TCGATAAATG CATTGATATT
CATCAGCTTG CCTTAGATAT TTATCAACGG ATACCGCAGT GGATTGGGAT CAGTGTTTGC
GTCGGCATTG GACCGACAAA AACCCTCGCT AAACTGGCAA ACCATGCAGC TAAACGTTAT
CCCGCGACGC GGGGCGTGGT TGACTTGCGC GACCGTGAAC GCCAACGACG GCTGATGGCG
CTTATCCCTG TCGACGAAGT CTGGGGAATA GGCCGTAGGC TTACAAAACG CTTGAACATC
ATGGGTATAA ATACCGCGTT GCAATTGGCG GATGCGCATC CAAAGCTTAT CCGCGACACC
TTTTCTGTCA CCGTTGAGCG CACGGTACGC GAACTTAACG GCATTGCCTG TGATGACATA
CAAGAGGTCG CCGCCACTAA GCAACAAATT ATCAGCTCCC GATCCTTTGG CAGCCGTATT
GATAATTTAG AAGCGATGCA ACAGGCAATC AATGAATACA CTTTTAGGGC CTGTGAAAAA
CTGCGCTCCG AGCGCCAGTA CGCTAAAGCG ATGTCAGTAT TTGTGCGTAC TAGCCCTTTT
AGCGATGCAA CTCCCCAGTA CAGCAAATCA CTGTCGGGCA GTTTAGTTCG CCCCAGCAAT
GATACGCGTG ATTTTGTCAC CCTTGGCCAA AGCCTACTGC AACGCATTTG GCGTGAAGGT
CATGCCTATG CAAAGGCCGG TGTCATGTTA GGGGATTTTT TTGGTGCTGG CGTGTTTCAG
CTTGGATTAT TCGATGACGT CACGCCTAGG CCTAAAAGCA AAGAGTTGAT GCAGTTACTC
GATAAAGTGA ACCACAGCGG TCATGGAAAA ATTTGGTTTG CAGGACAAGG TATTGACCCG
ACTTGGGGAA TGAAGCGTGA GCAGCTTTCC CCTCGTTACA GCACCCAATG GGCACAATTG
CCCATAGTGA AATAA
 
Protein sequence
MTPSLFALVD CNNFYASCER MFRPDLAGRP IVVLSNNDGC VVARSAEAKQ LGIKMAVPVY 
QIANQLRQHH VAVFSSNYAL YADISNRVMT TLEQMVPKVE VYSIDEAFLD LSRLDKCIDI
HQLALDIYQR IPQWIGISVC VGIGPTKTLA KLANHAAKRY PATRGVVDLR DRERQRRLMA
LIPVDEVWGI GRRLTKRLNI MGINTALQLA DAHPKLIRDT FSVTVERTVR ELNGIACDDI
QEVAATKQQI ISSRSFGSRI DNLEAMQQAI NEYTFRACEK LRSERQYAKA MSVFVRTSPF
SDATPQYSKS LSGSLVRPSN DTRDFVTLGQ SLLQRIWREG HAYAKAGVML GDFFGAGVFQ
LGLFDDVTPR PKSKELMQLL DKVNHSGHGK IWFAGQGIDP TWGMKREQLS PRYSTQWAQL
PIVK