| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2004 |
|---|
| Symbol | |
|---|
| ID | 7086838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2364513 |
|---|
| End bp | 2365670 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643460907 |
|---|
| Product | Cupin 4 family protein |
|---|
| Protein accession | YP_002357931 |
|---|
| Protein GI | 217973180 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.367195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000511749 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCG ATATTAACGG CTTAACGCCC GCGCAATTTC TAGCAGAGTA TTGGCAGAAA
AAACCCTTGG TGATCCGCCA AGGATTCAAG CATTTTCAAG ATTTAGTTTC GCCCGAAGAA
TTAGCTGGCT TAGCCATGGA TGAGCTGGTG GAATCTCGGC GGGTGTACCA ACAAGCTGGC
CAATGGCAGG CGGAATTTGG TCCCTTTGAT TCCTACGATC ATCTCGGTGA ACGGGATTGG
ACTCTGATCG TCCAAGCTTT GAATAACTGG GTGCCCGATG CGGAGGCCTT GATCCAATGC
TTTGATTTTA TTCCGCGCTG GCGTTTAGAT GATGTGATGG TGAGCTTTGC GACTCCTGGC
GGTGGAGTAG GCCCGCATAT CGATCTGTAT GATGTGTTTA TTTGCCAAGG TTCGGGACGT
CGCCGTTGGC GTGTGGGCGA TCTGGGGCCG CACAAAGAGT TTGCCGCCCA TCCCGCTTTG
CTGCACACAG AAGCCTTTGA ACCGATTATC GATACTGAGT TGTTGCCCGG CGACATCCTT
TATATTCCCC CCGGATTCCC CCATGACGGC ATAACCTTAG AACAGTCGTT AAGTTTTTCA
GTGGGTTATC GCACCGCCTC CGCTAAAGAT ATGATAAGTG CTTTGGCCGA TCATTTGTCT
GAACAGGATT TAGGCGCACA GCAGATTGAA GATCCAGATC GCGAGCTGAC CACCCGCAGT
GGCTGTGTCG ATAATGGCGA TTTAGCGCGG CTACGTACCC AACTGACCAA TATGTTGACC
GATGAACTGG TGAGCGAGTT TTCGGGCCGC TATTTAACTC AGTCAAAATG CGCCTTAGAT
TTACCCGATG AGCCATTGGA CATCACGCAA GACGAAGTGC TCGCTTGGCT CGATGAGCAG
CCGCTTATTC GCCTCGGCGG GCTGCGCTGT TTGTATTTTG ATATCAATGT GGCACAGGGC
GTTGTCTATA TTAATGGTGA TAAGTATCAG CTTTCAGCCG AATTGGCCGC AGTGATCCCA
TTACTATGTG ATAGTAATCA GTTGGATAAA GCTGCCTTAG CCCCTTGGTT AGCCCATGCT
GATTTGCTCA CGCAACTTAC CGAGTGGGTG AATCTAGGCT ACTGGTACTT TGAAGATCTC
AGCGATGAAG AGTGTTAA
|
|---|
| Protein sequence | MQLDINGLTP AQFLAEYWQK KPLVIRQGFK HFQDLVSPEE LAGLAMDELV ESRRVYQQAG
QWQAEFGPFD SYDHLGERDW TLIVQALNNW VPDAEALIQC FDFIPRWRLD DVMVSFATPG
GGVGPHIDLY DVFICQGSGR RRWRVGDLGP HKEFAAHPAL LHTEAFEPII DTELLPGDIL
YIPPGFPHDG ITLEQSLSFS VGYRTASAKD MISALADHLS EQDLGAQQIE DPDRELTTRS
GCVDNGDLAR LRTQLTNMLT DELVSEFSGR YLTQSKCALD LPDEPLDITQ DEVLAWLDEQ
PLIRLGGLRC LYFDINVAQG VVYINGDKYQ LSAELAAVIP LLCDSNQLDK AALAPWLAHA
DLLTQLTEWV NLGYWYFEDL SDEEC
|
|---|
| |