| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1992 |
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| Symbol | |
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| ID | 7086826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2351915 |
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| End bp | 2353057 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643460895 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002357919 |
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| Protein GI | 217973168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0274072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000073122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGCCAG CCGATGATTA TCCCGTAACG GAACTAACAA AAGCGCTGAT CGCCCGCCCT
TCGGTGACGC CACTTGATGA AGGTTGTCAA ACCTTAATGG CTGAAAGACT CAGCGCCATC
GGCTTTAATA TCGAACCTAT GGTATTTGAA GACACCACCA ATATGTGGGC TCGCCGTGGC
AATGAAGGTC CGGTCTTTTG TTTTGCCGGC CACACAGATG TTGTGCCAAC AGGTGATGTG
AGCCGCTGGC ACACGCCGCC TTTTGTGCCC ACCATTATCG ACGGCTACTT ATATGGCCGC
GGCGCCGCGG ACATGAAAGG TTCATTGGCG GCTATGGTCA TTGCCACCGA ACGTTTTGTG
GCTAAACATC CCGATCATAA TGGCTCAATC GCCTTTTTGA TCACCAGCGA TGAAGAAGGC
CCCTTCATCA ACGGCACGAC GCGAGTCATT GATACCTTAG AAGCGCGCAA CGAGAAGATC
ACCTGGGCGT TAGTCGGCGA ACCCTCATCA ACCCTAAAGC TGGGCGATGT GGTCAAAAAT
GGTCGCCGCG GCAGTTTAAC CGGCAACTTA ACCGTGAAAG GCATTCAAGG CCACGTGGCC
TATCCACATC TTGCTGATAA TCCAATCCAC AAAGCCGCGC CTTTCTTAGC CGAGCTGAGC
CAGATGCACT GGGATAATGG CAATGAGTTC TTTCCGCCCA CCAGCTTCCA AATCGCCAAT
ATTAATGGCG GCACCGGCGC ATCGAATGTG ATCCCCGGCG CATTGGACGT GATGTTTAAC
TTCCGTTACT CCACCGAAGT GACCGCCGAC ATCTTGATTG AGCGGGTTGA GACTTTATTA
AAAGCCCATG AGCTAGATTA CGATATCAGC TGGATTTTCA ATGGTCTGCC ATTTTTAACC
GGCGATGGCC CACTGCTTGA CGCGACCCGT ATTGCTATTC GCCAAGTGAC AGGCTATGAA
ACCGATCCAC AAACCACAGG CGGCACATCG GACGGACGCT TTATCGCGCC AACGGGTGCT
AAAGTGTTAG AGCTTGGCCC AGTGAACGCC ACCATTCATA AAGTGAATGA ATGCGTTAAA
GTGGACGACC TTGAGCAGCT AGCCCTGTGT TATGAAGTGA TTTTGGAACA ACTATTGTGC
TAA
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| Protein sequence | MMPADDYPVT ELTKALIARP SVTPLDEGCQ TLMAERLSAI GFNIEPMVFE DTTNMWARRG
NEGPVFCFAG HTDVVPTGDV SRWHTPPFVP TIIDGYLYGR GAADMKGSLA AMVIATERFV
AKHPDHNGSI AFLITSDEEG PFINGTTRVI DTLEARNEKI TWALVGEPSS TLKLGDVVKN
GRRGSLTGNL TVKGIQGHVA YPHLADNPIH KAAPFLAELS QMHWDNGNEF FPPTSFQIAN
INGGTGASNV IPGALDVMFN FRYSTEVTAD ILIERVETLL KAHELDYDIS WIFNGLPFLT
GDGPLLDATR IAIRQVTGYE TDPQTTGGTS DGRFIAPTGA KVLELGPVNA TIHKVNECVK
VDDLEQLALC YEVILEQLLC
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