Gene Sbal223_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1964 
SymbolhscB 
ID7090131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2323429 
End bp2323953 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID643460867 
Productco-chaperone HscB 
Protein accessionYP_002357891 
Protein GI217973140 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0117247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00199391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTATT TCGAGCTGTT TAAATTTTCC CCTGCCTTCG ATATTGATAC CGCCTTACTT 
GCAGAACGCT ATCGCGAACT GCAACGGGCG GTTCATCCCG ATAAATTTGC CAATGATACT
GAGCAGCAAA AATTGCTGTC GGTGCAGCGC ACGGCGCAAG TCAATGATGG TTTTCAAACC
TTAAAAGATC CCATTCGCCG CGCCGAGCAT ATGTTGTCGC TGCGTGGTAT TGAATTAAGC
CATGAAACCA CGACAGTGAA AGATACTGGC TTCTTGATGC AGCAAATGGA ATGGCGCGAG
GCGTTGGAAG ACATACGCGA TAGTGACGAT CCTCAAGCGA GTATTGACGA GCTATATCAA
TCGTTTGCGC AGTACCGCGC TCAACTCACT CAGCAATTGA CTCAACTGTT AACCAGTGAG
CAGGCTGAAG ATGCATTGTT AGCGGCGGAT CAAGTTCGCA AACTCAAATT TATGGCAAAA
TTACACGACG AGTTGACCAG AGTCGAAGAC GCTCTGTTAG ATTGA
 
Protein sequence
MNYFELFKFS PAFDIDTALL AERYRELQRA VHPDKFANDT EQQKLLSVQR TAQVNDGFQT 
LKDPIRRAEH MLSLRGIELS HETTTVKDTG FLMQQMEWRE ALEDIRDSDD PQASIDELYQ
SFAQYRAQLT QQLTQLLTSE QAEDALLAAD QVRKLKFMAK LHDELTRVED ALLD