Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1964 |
Symbol | hscB |
ID | 7090131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2323429 |
End bp | 2323953 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460867 |
Product | co-chaperone HscB |
Protein accession | YP_002357891 |
Protein GI | 217973140 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0117247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00199391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTATT TCGAGCTGTT TAAATTTTCC CCTGCCTTCG ATATTGATAC CGCCTTACTT GCAGAACGCT ATCGCGAACT GCAACGGGCG GTTCATCCCG ATAAATTTGC CAATGATACT GAGCAGCAAA AATTGCTGTC GGTGCAGCGC ACGGCGCAAG TCAATGATGG TTTTCAAACC TTAAAAGATC CCATTCGCCG CGCCGAGCAT ATGTTGTCGC TGCGTGGTAT TGAATTAAGC CATGAAACCA CGACAGTGAA AGATACTGGC TTCTTGATGC AGCAAATGGA ATGGCGCGAG GCGTTGGAAG ACATACGCGA TAGTGACGAT CCTCAAGCGA GTATTGACGA GCTATATCAA TCGTTTGCGC AGTACCGCGC TCAACTCACT CAGCAATTGA CTCAACTGTT AACCAGTGAG CAGGCTGAAG ATGCATTGTT AGCGGCGGAT CAAGTTCGCA AACTCAAATT TATGGCAAAA TTACACGACG AGTTGACCAG AGTCGAAGAC GCTCTGTTAG ATTGA
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Protein sequence | MNYFELFKFS PAFDIDTALL AERYRELQRA VHPDKFANDT EQQKLLSVQR TAQVNDGFQT LKDPIRRAEH MLSLRGIELS HETTTVKDTG FLMQQMEWRE ALEDIRDSDD PQASIDELYQ SFAQYRAQLT QQLTQLLTSE QAEDALLAAD QVRKLKFMAK LHDELTRVED ALLD
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