| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1956 |
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| Symbol | |
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| ID | 7090123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2316427 |
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| End bp | 2317677 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643460859 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_002357883 |
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| Protein GI | 217973132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00381099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0209903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAC CGTTAGCCTT ATCTATTGGT TGGCGTTTTT ATCGCGCCCG CCAATCCAAC
AGCTTTATTA GCTTTATTTC CTTCGCATCG ACTGCGGGCA TTGCCTTAGG CGTGGCGGTA
TTGATCATCG TCTTGTCGGC AATGAATGGT TTTGAGCGCG AGTTAGAACA TAGATTGCTT
GGCGTCGTGC CGCAGGCGGA CATAGTCGGT GTGAGCGAGC CTATCGCGAA CTGGCAGAGT
GTTGCCGAGG GGGCGCTGTT AATTGAAGGT ATTCGCGGCG CGGCGCCTTT TATCCGCATG
CAAGGTTTAG TGCAAAAGCC CGGCGGTTTT CAAGGCTTAG CTGTCGTGGG GATCGATCCA
AAAGAAGAAA TCAAGGTCTC GACACTGGCG CAATTTATGA GCGATGCCAG CTGGCAGAGT
CTAGGCCAAG ATGAAAATCA CATCGTCCTT GGGCAGAGTT TGTTGACCAA GTTGGGGCTT
GAGGTTGGCG ATACGTTGGC CTTATATGTG CAGGATATGG ATCCAGAAGC GGCGGGCAGT
TTACGCGCGG CGAAGAGCCA TCGTTTTGTG GTGTCTGGCG CCTATAATCT TGGCGGCGAG
CTTGAGCTGA CTACGGCTTA TATTCCTATG CAGTACGCGG CGCAGATTTT GAACATGAAG
AGCGGCGTGA CTGGCGTGCG TATTAGCGTC GATAAAGTGT TTGATGCGCC CGTCAAAGTG
CGCGAGCTTG GTTATGCGCA AAAGCAGTCG GTGTATATCA GTGACTGGAC CCGTACCCAA
GGGCATTTAT ATCAAGACAT TCAGTTGGTT CGCACAGTCA TGTACTTAGT GCTTGTGCTG
GTGATTGGTG TCGCTTGCTT TAATATCGTT TCCACCTTAG TGATGGCAGT GCGGGATAAA
GCCTCTGAGA TTGCGATTTT GATGACTATG GGCCTGAGCC GCCTTGCTGT GATGGGTATT
TTCATGGTGC AGGGCGCCTT GAATGGGCTG CTTGGCTGTG GTCTTGGCGG GATTATCGGC
GTGAGTGTGG CACTGAATTT AAGTGCGATT GCCAGTACTA TGGAGCAGTT ACTCGGTATT
CAACTGCTGT CAGCCGATGT GTACTTTGTC GATTTTTTAC CGTCAGAGTT ACATGGCTCA
GATGCGGTGT TGGTGATTGT GATGGCGTTC GTGATGAGCT TAATCGCGAC ACTCTATCCT
GCTTGGAAAG CCAGTCAGAT TGCGCCAGCG CAAGCTTTAG CGGGTAGATA A
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| Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIIVLSAMNG FERELEHRLL
GVVPQADIVG VSEPIANWQS VAEGALLIEG IRGAAPFIRM QGLVQKPGGF QGLAVVGIDP
KEEIKVSTLA QFMSDASWQS LGQDENHIVL GQSLLTKLGL EVGDTLALYV QDMDPEAAGS
LRAAKSHRFV VSGAYNLGGE LELTTAYIPM QYAAQILNMK SGVTGVRISV DKVFDAPVKV
RELGYAQKQS VYISDWTRTQ GHLYQDIQLV RTVMYLVLVL VIGVACFNIV STLVMAVRDK
ASEIAILMTM GLSRLAVMGI FMVQGALNGL LGCGLGGIIG VSVALNLSAI ASTMEQLLGI
QLLSADVYFV DFLPSELHGS DAVLVIVMAF VMSLIATLYP AWKASQIAPA QALAGR
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