Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1953 |
Symbol | |
ID | 7090120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2313568 |
End bp | 2314239 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460856 |
Product | hypothetical protein |
Protein accession | YP_002357880 |
Protein GI | 217973129 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.38277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0743494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTTCACTG ACACCAATCC GTATTTTAGT GTGCCTCACC CTTTTACCGC CTACTTAAGT CTGTGGCCGA GTTCCGAGCC ATTACCCTCT GAAATGGCAT TAAGATCAAT GCAATCATTG GGTATTCAGC TACTCAGCGA AGTGAAAACG CTCGAAGCCA ATTGCTTGCT GCAACTGCGC CATTTAGACA ACGACGCTAA AGTGGTGGTG GACTTTTTAA AGCTGCAATC CCGCAAAGTG GATTTAGTGC TGCAGCATGT ATTAGAGAAA GAAACCCAAG AAGGCGAAAA ATGCATTGGC AATCAGTTTG GTGGCAGCGG CCTAAGACTG ATCACGCCCA CAGCCTTAAC CATCGGCTCA AACTATAAAA TCACCCTGTT TATTCACGAC GAGTTAGTCG CCATTCTCTG TTTTGGCAAA GTAACCGCCT CTACCGCGCA AAAAACGCTA TCTACCGAGA GCAGCGCCAA TCGAGATACT AATAGCGGTG ACACACAAAG CCCCGAGTTC AATACTCAGG CGGAACTTCA GTCTCCTGCC ACGCAATGGC AAACCGACTT TGAATTCAGT CAAATTCTCG AAGCTGACGT GGAGCAATTA GTCAAAGCCA GCCTCAATGT GCAGCAGAAA CAACTCAAGT TACGTAAACT CGCCAGAGAC GAACGTCAAT AG
|
Protein sequence | MFTDTNPYFS VPHPFTAYLS LWPSSEPLPS EMALRSMQSL GIQLLSEVKT LEANCLLQLR HLDNDAKVVV DFLKLQSRKV DLVLQHVLEK ETQEGEKCIG NQFGGSGLRL ITPTALTIGS NYKITLFIHD ELVAILCFGK VTASTAQKTL STESSANRDT NSGDTQSPEF NTQAELQSPA TQWQTDFEFS QILEADVEQL VKASLNVQQK QLKLRKLARD ERQ
|
| |