Gene Sbal223_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1897 
Symbol 
ID7090064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2238851 
End bp2240077 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content50% 
IMG OID643460801 
Productnucleoside recognition domain protein 
Protein accessionYP_002357825 
Protein GI217973074 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.155704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTAATC GCGTATGGTT AGCTTTCTTT GTTACGGCAT TGCTGGCAAT AGCGGTGCAA 
CTGTTCAATG GGCACATAGA AGTCCTATCG GCTTCGGTCG CCGCATTATT TGCTAGCGCT
AAGCTTGCCG CTGAAATTTC CCTTGGGCTG ATTGGTGTAC TTTCTCTGTG GATGGGATTG
ATGCAGGTGG GCGAGAAGGC CGGAGTGGTC AGCGCTATCG CCTTTGTGTT TGAGCCCTTA
CTGCGCCGCT TGATGCCAGA AGTGCCCAAG GGCCATCCCG CCTTTGGCAG TATCACGATG
AATTTAACGG CGAATATTTT TGGTTTAGAT AATGCCGCCA CGCCGCTTGG TTTAAGGGCA
ATGCATGATT TGCAGAGTTT AAATCCGCTA AAAACCGTGG CGACTAATGC ACAAATCTTA
TTTTTAGTGC TCAATACTTC CTCTGTGACC TTAGTGCCTG TGACAGTATT CCTTTACCGT
GCCCAGCAAG GTGCAGCCGC GCCTGCGGAT ATTTTCCTAC CGATTTTACT GGCAACCTCG
GCCTCGACAT TGGCGGGCTT ACTGGTAGTG GCGTTAGTGC AGCGGATTTC GTTATTGAAC
TCAGTGGTGC TCGGTTATGG CGCCTTGATG CTCTCTGGCC TAGTGGCGAG TGGTTTTTAT
CTGATGACCT TAAGTGCTGA AGCCATTGGC ACAGTGTCGA CGGCAATGGG TAACGGTATC
TTGCTGTTAC TGGTTTTTAC CTTTGTGATC GTTGCGGGCA TCCGCAAAGT GGCGGTTTAT
GATGAGTTTA TTGAAGGGGC GAAGGCGGGT TTTGCCCAAT CTATCCAACT GATCCCTTAT
TTGCTCGCCA TGCTATTAGC GATCGGTTTA CTGCGCGCAT CCGGTGCTTT GGATTATCTG
TTGCACTTGA TTGCCAGTGG CGTGCGGATA TTGGGTTTTG ATACGCGTTT TGTCGATGCT
ATGCCGACCG CGCTGATGAA GCCTTTTAGT GGTTCAGGCG CCAGAGCCAT GATGCTCGAG
ACAATGGATC ATCACGGCGT CGATTCTTTT GCTGGCCGAT TAGCGGCGAT TTTTCAGGGC
AGCACTGAAA CTACTTTTTA TGTTCTCGCT GTGTATTTTG GCTCTGTGGG CATTCGTCAT
GGCCGCCACG CCTTAGCCTG TGGGTTAACC GCGGATTTTG CGGGGATCAG CGCTGCGATT
GCCGTTTGTT ATTGGTTTTA TGGATAA
 
Protein sequence
MLNRVWLAFF VTALLAIAVQ LFNGHIEVLS ASVAALFASA KLAAEISLGL IGVLSLWMGL 
MQVGEKAGVV SAIAFVFEPL LRRLMPEVPK GHPAFGSITM NLTANIFGLD NAATPLGLRA
MHDLQSLNPL KTVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAAAPAD IFLPILLATS
ASTLAGLLVV ALVQRISLLN SVVLGYGALM LSGLVASGFY LMTLSAEAIG TVSTAMGNGI
LLLLVFTFVI VAGIRKVAVY DEFIEGAKAG FAQSIQLIPY LLAMLLAIGL LRASGALDYL
LHLIASGVRI LGFDTRFVDA MPTALMKPFS GSGARAMMLE TMDHHGVDSF AGRLAAIFQG
STETTFYVLA VYFGSVGIRH GRHALACGLT ADFAGISAAI AVCYWFYG