| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1892 |
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| Symbol | tmk |
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| ID | 7090059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2233975 |
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| End bp | 2234601 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643460796 |
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| Product | thymidylate kinase |
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| Protein accession | YP_002357820 |
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| Protein GI | 217973069 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.243598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0455674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGTTT TTGCAAAATT TATCGTTATT GAAGGTTTAG AAGGCGCGGG TAAGTCGAGT
GCGATTAACC TTATTCGCGA CTTTATTGAG AAACATACGG GTAAAGCGCC GATCTGCACT
CGCGAGCCGG GTGGCACGCC ACTGGCCGAA CGTATCCGTG ATTTGGTCAA AATTGCCGAT
GCGACCGATC CCCTGTGTGA CGAGGCCGAG TGTTTACTCA TCTACGCCGC CAGAGCCCAG
TTGGTTGCTA ATGTCATTAA GCCTGCGCTT GCGCAGGGTC AATGGGTATT GGGTGACAGA
CACAATTTAT CGTCACTGGC CTATCAAGGT GGTGGCAGGG GCTTAATGCC TTTAGTGGAA
GCGGTGAGCA CTGCCACCCT AAAAGGCTTT AAACCCGATC TCACCTTGTA CTTAGATTTA
GATCCTAAGC TTGGGCTAAC CCGCGCGGCT AAACGCGGTG AGCTTGATAG AATCGAGCAA
CAAGCGATTG ATTTCTTTGA ACGGGCTCGC GCCACTTACC TTAAACTTGC CAGCGAAGAT
GACAGCATAG TGGTTATCGA TGCGAGCCAA ACCATGGCCG AAGTGCATAA AGATATCTTA
GCCGTGCTAC AGGCGATGGC ATGGTAG
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| Protein sequence | MSVFAKFIVI EGLEGAGKSS AINLIRDFIE KHTGKAPICT REPGGTPLAE RIRDLVKIAD
ATDPLCDEAE CLLIYAARAQ LVANVIKPAL AQGQWVLGDR HNLSSLAYQG GGRGLMPLVE
AVSTATLKGF KPDLTLYLDL DPKLGLTRAA KRGELDRIEQ QAIDFFERAR ATYLKLASED
DSIVVIDASQ TMAEVHKDIL AVLQAMAW
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