| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1876 |
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| Symbol | |
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| ID | 7086550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2217311 |
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| End bp | 2219536 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460780 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002357804 |
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| Protein GI | 217973053 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.436386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000229787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC
ACCCTCTCAC TTTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA
ACCCGTGATA TCTCGTTATC GGGTCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA
GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG
AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT
GAACTGCAGC AAAAAGGTTA TGACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT
GAAAAGTCAA TTAAAACCCG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTG
CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT
CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCTC ACGTTGCTCA TATGACCGAC
GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC
GTGCTGACGC AAAAAGATGG CCAAGAAGTA GTGCTCAAGT CCGGTCTTAA GCTGCTGGCT
GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT
GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG
ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTA
TTTGACAAGC ATGCGGCGCT TTTCGCTGAA TTAGGTGTAG ATGTTAACAA CGGTTTTGGT
GATGTTTATG CCAAGATCGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT
ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC
ACCAATTTAC ACGTGCCAAG CGACATCATT ATCGATGCAT CTATGCCTGC TGCGATTCGT
TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC CATGATCCCA
GATCGTTGCT ATGCGGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT
TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA
GAGTACGGCA GCCACGACAA GACCTTTGAA ATGCCTGCTG ACGGTGTGGT CAACGTTGTC
GATGCAAGTG GTAAGGTATT GATGAGCCAT AACGTAGAAG CGGGCGATAT CTGGAGAATG
TGCCAAGTTA AAGACGCGCC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT
TTAAGCAATA CCCCAGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCGCAAATC
ATTGCAAAAG TGCAGCAGTA TCTGCCAGAA CATGACACTG ATGGCTTAGA TATCAGCATC
ATGTCTCCAG AAGACGCGAC GCGTTTGTCT TTGGCTCGCA TCAAAGAAGG CAAAGATACC
ATTTCAGTTA CGGGTAACGT TCTACGTGAC TACCTGACTG ACTTGTTCCC CATCCTAGAG
CTGGGCACCA GTGCCAAAAT GCTATCAATC GTTCCGTTAA TGAACGGCGG CGGTCTATTT
GAAACAGGTG CGGGCGGTAG TGCGCCTAAG CACGTGCAAC AGGTTGAAAA AGAAGGTCAC
TTACGTTGGG ATTCACTCGG TGAATTCTTA GCTCTGGCGG CGTCTCTTGA GCATTTAAGT
CAAACTGTCG ATAATCCAAA AGCCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGT
CAATTCTTAG ATAGCAATAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA TAACCGTGGC
AGCCATTTCT ACTTAGCTAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG
CAGTTACAAG CCCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT
GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA
GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA ACTGTTGATT
GCTTAA
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| Protein sequence | MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE
AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP HYPDEPKTDA
EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD
GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER
EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE
EYGSHDKTFE MPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTVDNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A
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