| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1875 |
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| Symbol | |
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| ID | 7086549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2216182 |
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| End bp | 2217030 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460779 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002357803 |
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| Protein GI | 217973052 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.414876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000094043 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACAT TAACGACTCA ATCAAGTCAG GTAAGCGTGT CTCAACCTCC TGTTAGCAAA
AGTATGAACA AAAACAAGTT TCCACCTAAA CGTGCCAATT CCAGCGCCAG TTCCCCAGCC
AAGAGCACGA TTAAACCCGC TAAGCCCGCG AGCAGAGGCC CTGCCAACCG CGCTACCGCC
GTAGATAGCA AAATGGCGCC AGCACGTAAT GCCAATGGCA GTTTAAAGAA AGAACCCTTT
AAAAATCCTA ATCGACGCGC AATTGCAGCG GCAAAACCGG TGCAGAGCCA AACGCTCGCA
CCGATTATCG TGCTGTTTAA TAAGCCTTTT GATGTACTTT GCCAGTTTAC CGATGAACAA
GGTCGCAAAA CTCTAAAAGA CTATATTCCC ATTGCTGACG TGTATGCCGC AGGCCGCTTA
GACAGAGACA GTGAGGGCTT GTTGCTGCTG ACCAATGACG GTCAATTACA GGCAAGACTG
ACAGAACCGA AAAAGAAAAC CTTTAAAACC TATTGGGTGC AAGTAGAAGG CGTTCCGACG
GAAGATGCAC TGACGAAACT GCGCCAAGGT GTTGAATTAA ATGATGGTAT GACGCTGCCT
GCTAAAGTCA AAATCATGGA TTCACCCGAT ATTGGGCCAC GTAATCCACC GGTGAGAGAA
CGCAAAAATA TCCCAACAAC TTGGCTAGAA ATCCAAATTC ATGAAGGTCG TAACCGCCAA
GTCAGACGCA TGACAGCGCA TATCGGTTTT CCGACCTTAA GATTAATCCG TTATAAAATA
GGCCAATGGA GTCTAGATAA TTTGCCATCG GGCGAGCATA AATGCATCCG CCTCGGTGAT
GAAGTCTAA
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| Protein sequence | MTTLTTQSSQ VSVSQPPVSK SMNKNKFPPK RANSSASSPA KSTIKPAKPA SRGPANRATA
VDSKMAPARN ANGSLKKEPF KNPNRRAIAA AKPVQSQTLA PIIVLFNKPF DVLCQFTDEQ
GRKTLKDYIP IADVYAAGRL DRDSEGLLLL TNDGQLQARL TEPKKKTFKT YWVQVEGVPT
EDALTKLRQG VELNDGMTLP AKVKIMDSPD IGPRNPPVRE RKNIPTTWLE IQIHEGRNRQ
VRRMTAHIGF PTLRLIRYKI GQWSLDNLPS GEHKCIRLGD EV
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