Gene Sbal223_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1874 
Symbol 
ID7086548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2215626 
End bp2216114 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID643460778 
ProductNUDIX hydrolase 
Protein accessionYP_002357802 
Protein GI217973051 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00903017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000719314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAAA GATATAAACC CAATGTGACC GTCGCTTGTA TTATTCATGC GACTTCACAG 
GACAAATATC TGATGGTGGA AGAGTGGATT GATGGCGAGC AGCGCTTTAA TCAGCCAGCG
GGTCACTTAG AAGCAAATGA AAGCTTAATC CAAGCCTGTG AGCGCGAAGT ATATGAGGAA
ACGGGGTTAT CACTTAACCC CCAAGGACTC GTCGGCATCT ATCAATTCAG CGCCAGTGAA
GACTTAGCCT TTGTGCGCTT TACCTTCTTC GTGCAGTTAG ATGATATGCC CTCACCTGCG
CCGCAGGACA ACGCTATCCA CAGTGCGCAC TGGCTGAGTT TTGCACAGAT AGAAGCCAAG
TCATCTTTAC TGCGCAGCCC CTTAGTGCTC GATTGCCTAA AAGACTATCT TAATAACGCA
CAACAGGGCC AAACTTATCC CCTCTCCTTA CTCAATAGTG ACCGCCTCGC GATAGCCCAA
GCGAGTTAG
 
Protein sequence
MSQRYKPNVT VACIIHATSQ DKYLMVEEWI DGEQRFNQPA GHLEANESLI QACEREVYEE 
TGLSLNPQGL VGIYQFSASE DLAFVRFTFF VQLDDMPSPA PQDNAIHSAH WLSFAQIEAK
SSLLRSPLVL DCLKDYLNNA QQGQTYPLSL LNSDRLAIAQ AS